e2e_plot_edrivers: Plot climatological year of environmental driving data.
In StrathE2E2: End-to-End Marine Food Web Model

Description Usage Arguments Details Value See Also Examples

Multi-panel time series plots of climatological annual cycles of driving data as provided in the input csv files.

1	e2e_plot_edrivers(model)

model

R-list object defining the model configuration compiled by the e2e_read() function.

The function plots a multi-panel page of time series plots of monthly values of the environmental driving data for the model.

Units for the plotted variables are as follows:

Sea surface irradiance: uE/m2/d
Suspended particulate matter: g/m3
Temperature: deg-C
Vertical diffusivity gradient: m/d (derived from the vertical diffusivity (m2/s) and mixing length scale (m))
External inflows: m3 per m2 sea surface of model domain (derived from proportion input per layer volume, layer thicknesses and areas)
River discharge: m3 per m2 sea surface of model domain (derived from proportion input to inshore volume, and inshore layer thickness and area)
Inshore significant wave height: m
Proportion of seabed disturbed: /d (aggregated over the three sediment classes in each zone)
External boundary nitrate concentration: mMN/m3
External boundary ammonia concentration: mMN/m3
External boundary phytoplankton concentration: mMN/m3
External boundary detritus concentration: mMN/m3
River nitrate concentration: mMN/m3
River ammonia concentration: mMN/m3
Atmospheric nitrate deposition flux: mMN/m2/d
Atmospheric ammonia deposition flux: mMN/m2/d

Graphical display in a new graphics window. Does not return any data object since the data plotted are all available as input csv files.

e2e_read, e2e_run, e2e_plot_fdrivers

# Load the 2003-2013 version of the North Sea model supplied with the package:
    model <- e2e_read("North_Sea", "2003-2013")
# Plot the annual cyles of driving data
    e2e_plot_edrivers(model)

# Direct the graphics output to a pdf file ... 
# or jpeg("plot.jpg"), png("plot.png")
    pdf(file.path(tempdir(), "plot.pdf"),width=8,height=6)
    e2e_plot_edrivers(model)
    dev.off()