EstHyper | R Documentation |
Estimate the hyper-parameter by calling the gls
function. The errors are allowed to be correlated and/or have unequal variances.
EstHyper(y, D, init.val)
y |
a vector of z-values. |
D |
a distance matrix defined based on the prior structure. Diagonal have to be zeros. |
init.val |
initial values for the transformed hyper-parameter. Default is 0. |
a vector of estimated hyper-parameter values plus log likelihood.
Jun Chen
Xiao, J., Cao, H., Chen, J. (2017). False discovery rate control incorporating phylogenetic tree increases detection power in microbiome-wide multiple testing. Bioinformatics, 33(18), 2873-2881.
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