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#' Construct geodesic between points in the tropical projective torus
#'
#' Construct a tropical geodesic between points in the tropical projective torus
#' @param D1 point in the tropical projective torus
#' @param D2 point in the tropical projective torus
#' @return list with the tropical line segment between the two points and the
#' distance between points
#' @author Ruriko Yoshida \email{ryoshida@@nps.edu}
#' @noRd
tropical.geodesic.dim.2 <- function(D1, D2, flag = 0){
k <- length(D1)
if(k != 2) warning("dimension has to be 2!")
for(i in 1:k)
D1[i] <- round(D1[i], 4)
for(i in 1:k)
D2[i] <- round(D2[i], 4)
if(length(D2) != k)
warning("dimension is wrong!")
addd <- 0
if(flag == 1){
tmp.D <- D2
D2 <- D1
D1 <- tmp.D
}
tmp.metric <- (D2 - D1)
sorted.tmp.metric <- sort.int(tmp.metric, index.return=TRUE)
D <- rep(0, k)
D[sorted.tmp.metric$ix[2]] <- D2[sorted.tmp.metric$ix[2]]
D[sorted.tmp.metric$ix[1]] <- min(D2[sorted.tmp.metric$ix[2]] - D1[sorted.tmp.metric$ix[2]] + D1[sorted.tmp.metric$ix[1]], D1[sorted.tmp.metric$ix[1]])
distance <- max(abs(D1 - D))
distance <- distance + max(abs(D2 - D))
segment <- matrix(rep(0, 6), nrow=2, ncol=3)
segment[,1] <- D1
segment[,2] <- D
segment[,3] <- D2
return(list(segment, distance))
}
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