intersectMatrix: intersectMatrix

Description Usage Arguments Examples

View source: R/intersectMatrix.R

Description

This function will count the intersection tally of AVS and genomic regions

Usage

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intersectMatrix(avs, regions, ...)

Arguments

avs

A GRanges object which is outputted by loadLd function

regions

A data frame. The data frame contains sample sheet identical to DiffBind or ChIPQC input sample sheets

...

Heatmap arguments

Examples

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## Not run: 
intersectMatrix(avs,
                regions=samples,
                col=c("white","grey10"),
                scale="none",
                margins=c(10,5),
                cexRow = 1,
                cexCol = 0.5,
                Rowv=NA,
                Colv=NA)

## End(Not run)

VSE documentation built on May 30, 2017, 8:14 a.m.