Files in adapr

Implementation of an Accountable Data Analysis Process

inst/cheatsheet_adapr.pdf inst/doc/ADAPRVignette.Rmd inst/adapr21/global.R inst/adapr21/server.R inst/adapr21/ui.R inst/adapr21/helpers.R vignettes/ADAPRVignette.Rmd vignettes/function_maps.pdf R/make_source_info.R R/importData.R R/Check_file_hash.R R/git_init.R R/adaprSheet.R R/sync_test_New.R R/sync_test_si.R R/project_report_markdown.R R/script_loader.R R/get.adapr.options.R R/Write.R R/get_project_info.R R/load_source_directory.R R/plant_tree.R R/git_history_search.R R/run_Program.R R/get_project_swap_directory.R R/openScript.R R/program_io_table.R R/Check_file_hash_source.R R/setProject.R R/git_add.R R/finalize_dependency.R R/add_library.R R/read_dependency.R R/rework_project_path.R R/swap_project_paths.R R/get.orchard.R R/project_directory_tree.R R/source_sync_si_load.R R/powerSyncProject.R R/updateAdaprConfig.R R/write_cap.R R/gitIngoreLibrary.R R/Harvest_trees.R R/scriptSubgraph.R R/Read.R R/source_sync_si.R R/create_file_info.R R/sync_test_2.R R/send_branch_si.R R/list_files.R R/id_new_packages.R R/git.commit.R R/searchScripts.R R/parallelsync_project.R R/create_markdown.R R/git_info.R R/hashcopy.R R/load_install_library_file.R R/file_delay.R R/git_config_test.R R/make_hyperlink.R R/Condense_file_info.R R/sprout_program.R R/git_path.R R/ID_sync.R R/Check_file_mtime_source.R R/Read_cap.R R/git_provenance.R R/default_setup.R R/Get.file.info.R R/write_dependency.R R/Graph.R R/publishers.R R/adaprInstall.R R/Sync_test_pi.R R/Digest.R R/create_program_graph_2.R R/Render.R R/makeFunction.R R/send_branch.R R/intialize.dependency.info.R R/Library.R R/dependency_class.R R/git_configure.R R/guress_read_fcn.R R/rapidPlot.R R/load_branch.R R/shinyTree.R R/adapr_update.R R/plant_orchard.R R/path_expand.2.R R/commit_project.R R/project_report_send_rmd.R R/make_summary_graph.R R/guess_write_fnc.R R/aWrite.R R/create_program_graph.R R/get.fs.time.R R/get_project_path.R R/sync_test.R R/Make_dependency_graph.R R/create_source_file_dir.R R/get_project_info_si.R R/hashtags.R man/arcRead.Rd man/checkVersion.Rd man/idPackages.Rd man/gitHistorySearch.Rd man/openProjectList.Rd man/guess.read.fcn.Rd man/showResults.Rd man/condenseFileInfo.Rd man/getFileSysTime.Rd man/removeProject.Rd man/checkRmdMode.Rd man/adaprDependencies.Rd man/gitConfigureTest.Rd man/ReadTrack.Rd man/setAdaprOptions.Rd man/projectReportSend.Rd man/getProjectInfo.Rd man/swapProjectPath.Rd man/Library.Rd man/listProjects.Rd man/gitProvenance.Rd man/reportProject.Rd man/plantOrchard.Rd man/gitAdd.Rd man/loadAdaprTest.Rd man/Load.branch.Rd man/gitConfigure.Rd man/gitInit.Rd man/parallelSync.Rd man/getUpstream.Rd man/makeScript.Rd man/checkFileHash.Rd man/project.directory.tree.Rd man/finalize_dependency.Rd man/scriptLoader.Rd man/gitCommit.Rd man/getDepSubgraph.Rd man/syncProject.Rd man/syncTestPI.Rd man/guessWriteFcn.Rd man/projectReportMarkdown.Rd man/git_path.Rd man/relocateProject.Rd man/fileInfoProjects.Rd man/dataDir.Rd man/getProjectPublishPath.Rd man/arcWrite.Rd man/AppLoadFlex.Rd man/runSourceDirectory.Rd man/createMarkdown.Rd man/graphProject.Rd man/sourceSyncSI.Rd man/checkFileHashSource.Rd man/makeFunction.Rd man/importData.Rd man/initProject.Rd man/read.dependency.Rd man/sendBranch.Rd man/updateAdaprConfig.Rd man/adaprSheet.Rd man/getFileInfo.Rd man/WriteTrack.Rd man/checkAdaprHashAlgo.Rd man/redirectTree.Rd man/initialize_dependency_info.Rd man/create_source_file_dir.Rd man/setProject.Rd man/readLibrary.Rd man/adapr-package.Rd man/Digest.Rd man/getSourceInfo.Rd man/rapidPlot.Rd man/readDependency.Rd man/adaprApp.Rd man/browsePubFiles.Rd man/sproutProgram.Rd man/path.expand.2.Rd man/removeScript.Rd man/getPubResults.Rd man/getAdaprOptions.Rd man/Read.cap.Rd man/firstProject.Rd man/scriptSubgraph.Rd man/defaultAdaprSetup.Rd man/listBranches.Rd man/syncTestSI.Rd man/removePackage.Rd man/adaprHomeDir.Rd man/createFileInfo.Rd man/resultsDir.Rd man/install.Rd man/reworkProjectPath.Rd man/getProjectSwapPath.Rd man/addPackage.Rd man/openScript.Rd man/makeHyperlink.Rd man/publishResults.Rd man/createProgramGraph.Rd man/adaprInstall.Rd man/getLibrary.Rd man/get_orchard.Rd man/monitorParallelSync.Rd man/plantTree.Rd man/adaprUpdate.Rd man/write.dependency.Rd man/commitProject.Rd man/runScript.Rd man/sendBranchSI.Rd man/loadFlex.Rd man/showProject.Rd man/getProjectPath.Rd man/Write.cap.Rd man/gitInfo.Rd man/syncTest.Rd man/syncTestProject.Rd man/searchScripts.Rd man/commit2char.Rd man/makeDependencyGraphObj.Rd man/idSync.Rd man/listScripts.Rd man/loadInstallLibraryFile.Rd man/getProject.Rd man/syncTrunk.Rd man/checkFileMtimeSource.Rd man/Read.Rd man/renderRmd.Rd man/sourceSyncSILoad.Rd man/getProjectInfoSI.Rd man/dependency-class.Rd man/installProjectPackages.Rd man/programIOTable.Rd man/Write.Rd man/installLibrary.Rd man/gitIgnoreLibrary.Rd man/makeSummaryGraph.Rd man/listDatafiles.Rd man/pullSourceInfo.Rd man/getProjectLibrary.Rd man/Graph.Rd