listDD | R Documentation |
The function listDD
lists the direct descendants from each node of a
tree. The tree can be of class phylo
,
phylo4 or phylo4d.
listDD(x, nameBy = c("label", "number"))
x |
A tree of class |
nameBy |
a character string indicating whether the returned list must be named by node labels ("label") or by node numbers ("number"). |
A list whose components are vectors of named nodes (or tips) for a given internal node.
Thibaut Jombart tjombart@imperial.ac.uk
listTips
which lists the tips descending from each
node.
treePart
which defines partitions of tips according to the
tree topology.
if(require(ape) & require(phylobase)){
## make a tree
x <- as(rtree(20),"phylo4")
plot(x,show.node=TRUE)
listDD(x)
}
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