aem | Construct asymmetric eigenvector maps (AEM) |
aem.build.binary | Construct a site-by-edge binary matrix |
aem.time | AEM for time series |
aem.weight.edges | Weight edges when constructing AEM variables |
bacProdxy | Bacterial production data set |
beta.div | Beta diversity computed as Var(Y) |
beta.div.comp | Decompose D in replacement and richness difference components |
chooseCN | Function to choose a connection network |
constr.hclust | Space- And Time-Constrained Clustering |
constr.hclust-class | Class For Constrained Hiereachical Clustering |
Cperiodogram | Contingency periodogram |
create.dbMEM.model | Combine dbMEM matrices corresponding to groups of sites |
dbmem | dbMEM spatial eigenfunctions |
directional.response | Directional indices of community change |
dist.ldc | Dissimilarity matrices for community composition data |
envspace.test | Perform a test of the shared space-environment fraction of a... |
forward.sel | Forward selection with multivariate Y using permutation under... |
forward.sel.par | Parametric forward selection of explanatory variables in... |
give.thresh | Compute the maximum distance of the minimum spanning tree... |
global.rtest | Global and local tests |
LCBD.comp | Compute LCBD from any D matrix |
listw.candidates | Function to create a list of spatial weighting matrices |
listw.explore | Interactive tool to generate R code that creates a spatial... |
listw.select | Function to optimize the selection of a spatial weighting... |
mastigouche | Mastigouche Lake network data set |
mem | Function to compute and manage Moran's Eigenvector Maps (MEM)... |
mem.select | Selection of the best subset of spatial eigenvectors (MEM,... |
mfpa | Multi-frequential periodogram analysis |
moran.bounds | Function to compute extreme values of Moran's I |
moranNP.randtest | Function to compute positive and negative parts of Moran's... |
moran.randtest | Function to compute Moran's index of spatial autocorrelation |
mspa | Multi-Scale Pattern Analysis |
msr | Moran spectral randomization |
msr.4thcorner | Moran spectral randomization for fourth-corner analysis |
msr.mantelrtest | Moran spectral randomization for Mantel test |
msr.varipart | Moran spectral randomization for variation partitioning |
mst.nb | Function to compute neighborhood based on the minimum... |
multispati | Multivariate spatial analysis |
ortho.AIC | Compute AIC for models with orthonormal explanatory variables |
orthobasis.poly | Function to compute polynomial of geographical coordinates |
plot.constr.hclust | Plotting Method For Space- And Time-Constrained Clustering |
plot.orthobasisSp | Function to display Moran's Eigenvector Maps (MEM) and other... |
plot.TBI | Plots of the outputs of a temporal beta diversity analysis |
rotation | Rotate a set of point by a certain angle |
scalogram | Function to compute a scalogram |
ScotchWhiskey | Scotch Whiskey Data Set |
stimodels | Space-time interaction in ANOVA without replication |
TBI | TBI: Difference between multivariate observations at T1 and... |
test.W | Function to compute and test eigenvectors of spatial... |
Tiahura | Tiahura Transect Fish Data Set |
tpaired.krandtest | Paired t-tests of differences between T1 and T2 for each... |
tpaired.randtest | Permutational paired t-test |
trichoptera | Trichoptera data set |
variogmultiv | Function to compute multivariate empirical variogram |
WRperiodogram | Whittaker-Robinson periodogram |
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