give.thresh: Compute the maximum distance of the minimum spanning tree...
In adespatial: Multivariate Multiscale Spatial Analysis
give.thresh R Documentation
Compute the maximum distance of the minimum spanning tree based on a distance
matrix
Description
It is used to select a truncation value for the dbMEM approach. It
returns the minimum value that keep all samples connected.
Usage
give.thresh(matdist)
Arguments
matdist
A distance matrix (class dist or matrix)
Value
The maximum distance in the minimum spanning tree.
Author(s)
Stéphane Dray stephane.dray@univ-lyon1.fr
Examples
xy <- matrix(rnorm(60),30,2)
dxy <- dist(xy)
th <- give.thresh(dxy)
adespatial documentation built on Sept. 11, 2024, 7:04 p.m.
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| give.thresh | R Documentation |
Compute the maximum distance of the minimum spanning tree based on a distance matrix
Description
It is used to select a truncation value for the dbMEM approach. It returns the minimum value that keep all samples connected.
Usage
give.thresh(matdist)
Arguments
matdist |
A distance matrix (class |
Value
The maximum distance in the minimum spanning tree.
Author(s)
Stéphane Dray stephane.dray@univ-lyon1.fr
Examples
xy <- matrix(rnorm(60),30,2)
dxy <- dist(xy)
th <- give.thresh(dxy)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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