plotEnsembleMean: Ensemble mean plots of AMBER results (bias, bias scores, etc)

In amber: Automated Model Benchmarking R Package

Description

This function plots ensemble mean, minimum, and maximum values of a statistical metric computed by scores.grid.time and scores.grid.notime.

Usage

plotEnsembleMean(long.name, metric, mod.path.list, modelIDs, myVariables,
  shp.filename = system.file("extdata/ne_110m_land/ne_110m_land.shp",
  package = "amber"), my.xlim = c(-180, 180), my.ylim = c(-60, 85),
  plot.width = 5, plot.height = 7, outputDir = FALSE,
  subcaption = "")

Arguments

long.name	A string that gives the full name of the variable, e.g. 'Gross primary productivity'
metric	A string that specifies what statistical metric should be plotted. This includes for instance 'bias', 'crmse', 'phase', 'iav', 'bias-score', 'rmse-score', 'phase-score', and 'iav-score'.
mod.path.list	A List of directories where AMBER output is stored for different model runs, e.g. list(mod01.path, mod02.path, mod03.path)
modelIDs	An R object with the different model run IDs, e.g. c('CLASSIC.CRUJRAv2', 'CLASSIC.GSWP3W5E5', 'CLASSIC.CRUNCEP')
myVariables	An R object with the variable names of interest, e.g. c('GPP.FluxCom', 'RECO.FluxCom').
shp.filename	A string that gives the coastline shapefile
my.xlim	An R object that gives the longitude range that you wish to plot, e.g. c(-180, 180)
my.ylim	An R object that gives the longitude range that you wish to plot, e.g. c(-90, 90)
plot.width	Number that gives the plot width, e.g. 8
plot.height	Number that gives the plot height, e.g. 4
outputDir	A string that gives the output directory, e.g. '/home/project/study'. The output will only be written if the user specifies an output directory.
subcaption	A string that defines the subcaption of the figure, e.g. '(a)'.

Value

Figures in PDF format.

Examples

library(amber)
library(classInt)
library(doParallel)
library(foreach)
library(Hmisc)
library(latex2exp)
library(ncdf4)
library(parallel)
library(raster)
library(rgdal)
library(rgeos)
library(scico)
library(sp)
library(stats)
library(utils)
library(viridis)
library(xtable)

long.name <- 'Gross Primary Productivity'
metric <- 'mod-mean'

mod01.path <- paste(system.file('extdata', package = 'amber'), 'model01', sep = '/')
mod02.path <- paste(system.file('extdata', package = 'amber'), 'model02', sep = '/')
mod.path.list <- list(mod01.path, mod02.path)
modelIDs <- c('CLASSIC.CRUJRAv2', 'CLASSIC.GSWP3W5E5')

myVariables <- c('GPP-GOSIF', 'GPP-MODIS')

plotEnsembleMean(long.name, metric, mod.path.list, modelIDs, myVariables,
 plot.width = 5, plot.height = 5.5)

amber documentation built on Aug. 28, 2020, 5:08 p.m.