get.annotation.needcols: Get annovarR annotation needed colnames according the...
In annovarR: Integrated Framework to Annotate Genetic Variants
Description
Usage
Arguments
Examples
Description
Get annovarR annotation needed colnames according the anno.name
Usage
1
2
3
get.annotation.needcols(anno.name = "",
database.cfg = system.file("extdata", "config/databases.toml", package =
"annovarR"))
Arguments
anno.name
Annotation name, eg. avsnp138, avsnp147, 1000g2015aug_all
database.cfg
Configuration file of annovarR databases infomation
Examples
1
get.annotation.dbtype('avsnp147')
annovarR documentation built on Jan. 9, 2018, 5:05 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Examples
Description
Get annovarR annotation needed colnames according the anno.name
Usage
1 2 3 | get.annotation.needcols(anno.name = "",
database.cfg = system.file("extdata", "config/databases.toml", package =
"annovarR"))
|
Arguments
anno.name |
Annotation name, eg. avsnp138, avsnp147, 1000g2015aug_all |
database.cfg |
Configuration file of annovarR databases infomation |
Examples
1 | get.annotation.dbtype('avsnp147')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.