checkValidPhylo: Check the Structure of a "phylo" Object
In ape: Analyses of Phylogenetics and Evolution
View source: R/checkValidPhylo.R
checkValidPhylo R Documentation
Check the Structure of a "phylo" Object
Description
This function takes as single argument an object (phy), checks its
elements, and prints a diagnostic. All problems are printed with a
label: FATAL (will likely cause an error or a crash) or MODERATE (may
cause some problems).
This function is mainly intended for developers creating
"phylo" objects from scratch.
Usage
checkValidPhylo(phy)
Arguments
phy
an object of class "phylo".
Value
NULL.
Author(s)
Emmanuel Paradis
Examples
tr <- rtree(3)
checkValidPhylo(tr)
tr$edge[1] <- 0
checkValidPhylo(tr)
ape documentation built on May 29, 2024, 10:50 a.m.
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View source: R/checkValidPhylo.R
| checkValidPhylo | R Documentation |
Check the Structure of a "phylo" Object
Description
This function takes as single argument an object (phy), checks its elements, and prints a diagnostic. All problems are printed with a label: FATAL (will likely cause an error or a crash) or MODERATE (may cause some problems).
This function is mainly intended for developers creating
"phylo" objects from scratch.
Usage
checkValidPhylo(phy)
Arguments
phy |
an object of class |
Value
NULL.
Author(s)
Emmanuel Paradis
Examples
tr <- rtree(3)
checkValidPhylo(tr)
tr$edge[1] <- 0
checkValidPhylo(tr)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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