check.loci: Check which loci frequently have high Fst across training...
In assignPOP: Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
Description
Usage
Arguments
Value
Description
This function reads through training locus file for each assignment test and counts the frequency of those loci and outputs the results in a text file.
Usage
1
check.loci(dir = NULL, top.loci = 20)
Arguments
dir
A character string to specify the folder with your cross-validation results. A slash should be entered at the end.
top.loci
An integer to specify how many top informative loci to output.
Value
This function output the results in a text file. It includes the top N informative loci in N rows, and each row has a list of loci sorted by its occurrence.
assignPOP documentation built on Oct. 28, 2021, 1:06 a.m.
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Description Usage Arguments Value
Description
This function reads through training locus file for each assignment test and counts the frequency of those loci and outputs the results in a text file.
Usage
1 | check.loci(dir = NULL, top.loci = 20)
|
Arguments
dir |
A character string to specify the folder with your cross-validation results. A slash should be entered at the end. |
top.loci |
An integer to specify how many top informative loci to output. |
Value
This function output the results in a text file. It includes the top N informative loci in N rows, and each row has a list of loci sorted by its occurrence.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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