View source: R/write.narrative.R
write.narrative | R Documentation |
write.narrative
displays suggested text and references that can be used in a manuscript to describe the extracted backbone
write.narrative( agents, artifacts, weighted, bipartite, symmetric, signed, mtc, alpha, s, ut, lt, trials, model, reduced_edges, reduced_nodes )
agents |
integer: number of agents in a bipartite graph, or nodes in a unipartite graph |
artifacts |
integer: number of artifacts in a bipartite graph |
weighted |
boolean: TRUE if input graph was weighted |
bipartite |
boolean: TRUE if input graph was bipartite |
symmetric |
boolean: TRUE if input graph was symmetric |
signed |
boolean: TRUE if a signed backbone was requested |
mtc |
string: type of multiple test correction |
alpha |
numeric: alpha significance threshold (used in statistical models) |
s |
numeric: sparsification parameter (used in sparsification models) |
ut |
numeric: upper threshold (used in global threshold) |
lt |
numeric: lower threshold (used in global threshold) |
model |
string: name of backbone null model |
reduced_edges |
numeric: percent reduction in number of edges |
reduced_nodes |
numeric: percent reduction in number of connected nodes |
trials: |
integer: number of trials used to estimate FDSM or oSDSM p-values |
NULL; only displays text in the console
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