plotOUtreesim: A function to visualize a multi-optimum OU process evolving...

In bayou: Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies

A function to visualize a multi-optimum OU process evolving on a phylogeny

Description

A function to visualize a multi-optimum OU process evolving on a phylogeny

Usage

plotOUtreesim(pars, tree, ptsperunit = 100, pal = rainbow, aph = 255, lwd = 1)

Arguments

pars	A bayou parameter list to simulate the OU process from
tree	A phylogenetic tree
ptsperunit	A number giving the number of points to simulate per unit time
pal	A color palette function
aph	The alpha value for transparency of the lines
lwd	The width of the lines

Value

**No return value**, called for **side effects**. The function **generates a plot** showing the simulated trait evolution over time.

bayou documentation built on June 10, 2025, 5:13 p.m.