priorSim: Simulates parameters from bayou models

In bayou: Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies

Simulates parameters from bayou models

Description

priorSim Simulates parameters from the prior distribution specified by make.prior

Usage

priorSim(prior, tree, plot = TRUE, nsim = 1, shiftpars = "theta", ...)

Arguments

prior	A prior function created by bayou::make.prior
tree	A tree of class 'phylo'
plot	A logical indicating whether the simulated parameters should be plotted
nsim	The number of parameter sets to be simulated
shiftpars	A vector of parameters that split upon a shift, default is "theta"
...	Parameters passed on to plotSimmap(...)

Value

A list of bayou parameter lists drawn from the prior.

bayou documentation built on June 10, 2025, 5:13 p.m.