Description Usage Arguments Value Author(s) See Also Examples
Scatter-plots for a series of arrays are produced. Which intensities
are plotted depends on whether the input BSData
is an instance of
"BeadSetIllumina"
or "AlleleSetIllumina"
1 2 |
BSData |
|
arrays |
Indexes to arrays |
markers |
Indexes to markers |
smooth |
If |
newFigure |
Logical indicating whether or not to clear the current device before
plotting. If |
maxPlots |
Numeric indicating the maximum allowed number of arrays to plot. Exceeding this limit will produce an error. |
... |
Additional graphical input parameters |
This function is called for its side effects
Lars Gidskehaug
BeadSetIllumina
,
AlleleSetIllumina
,
plotPreprocessing
,
plotGenotypes
1 2 3 4 5 6 7 8 9 10 | ## Not run:
#Read a BeadSetIllumina object using files in example data directory
rPath <- system.file("extdata", package="beadarrayMSV")
BSDataRaw <- readBeadSummaryOutput(path=rPath,recursive=TRUE)
## Plot G vs. R
dev.new()
scatterArrays(BSDataRaw,smooth=FALSE)
## End(Not run)
|
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