plot_vertex_measures: Plot vertex-level graph measures at a single density or...

In brainGraph: Graph Theory Analysis of Brain MRI Data

Plot vertex-level graph measures at a single density or threshold

Description

Creates boxplots of a single vertex-level graph measure at a single density or threshold, grouped by the variable specified by group.by and optionally faceted by another variable (e.g., lobe or network).

Usage

plot_vertex_measures(g.list, measure, facet.by = NULL,
  group.by = getOption("bg.group"), type = c("violin", "boxplot"),
  show.points = FALSE, ylabel = measure, ...)

Arguments

g.list	A brainGraphList or a list of brainGraph objects
measure	A character string of the graph measure to plot
facet.by	Character string indicating the variable to facet by (if any). Default: NULL
group.by	Character string indicating which variable to group the data by. Default: getOption('bg.group')
type	Character string indicating the plot type. Default: 'violin'
show.points	Logical indicating whether or not to show individual data points (default: FALSE)
ylabel	A character string for the y-axis label
...	Arguments passed to geom_boxplot or geom_violin

Value

A trellis or ggplot object

Author(s)

Christopher G. Watson, [e-mail]

Examples

## Not run: 
p.deg <- plot_vertex_measures(g[[1]], facet.by='network', measure='degree')

## End(Not run)

brainGraph documentation built on June 22, 2024, 7:36 p.m.