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cRegulome: Obtain and Visualize Regulome-Gene Expression Correlations in Cancer
Builds a 'SQLite' database file of pre-calculated transcription factor/microRNA-gene correlations (co-expression) in cancer from the Cistrome Cancer Liu et al. (2011) <doi:10.1186/gb-2011-12-8-r83> and 'miRCancerdb' databases (in press). Provides custom classes and functions to query, tidy and plot the correlation data.
Getting started
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Package details |
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| Author | Mahmoud Ahmed [aut, cre] (<https://orcid.org/0000-0002-4377-6541>) |
| Maintainer | Mahmoud Ahmed <mahmoud.s.fahmy@students.kasralainy.edu.eg> |
| License | GPL-3 |
| Version | 0.3.2 |
| URL | https://docs.ropensci.org/cRegulome https://github.com/ropensci/cRegulome |
| Package repository | View on CRAN |
| Installation |
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