collapse_group: Collapse groups in cellMarkers object
In cellGeometry: Geometric Single Cell Deconvolution
collapse_group R Documentation
Collapse groups in cellMarkers object
Description
Experimental function for collapsing groups in a cellMarkers objects.
Usage
collapse_group(mk, groups, weights = NULL)
Arguments
mk
A 'cellMarkers' class object.
groups
Character vector of groups to be collapsed. The collapsed group
retains the name of the 1st element.
weights
Optional vector of weights for calculating the mean gene
expression across groups. If left as NULL weights are determined by the
total cell count in each group.
Value
An updated cellMarkers class object.
cellGeometry documentation built on April 20, 2026, 1:06 a.m.
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| collapse_group | R Documentation |
Collapse groups in cellMarkers object
Description
Experimental function for collapsing groups in a cellMarkers objects.
Usage
collapse_group(mk, groups, weights = NULL)
Arguments
mk |
A 'cellMarkers' class object. |
groups |
Character vector of groups to be collapsed. The collapsed group retains the name of the 1st element. |
weights |
Optional vector of weights for calculating the mean gene
expression across groups. If left as |
Value
An updated cellMarkers class object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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