plot_biasvar: Plot bias-variance decomposition
In cellGeometry: Geometric Single Cell Deconvolution
plot_biasvar R Documentation
Plot bias-variance decomposition
Description
Produces a ggplot2 plot of total error (MSE) against bias and variance based
on results generated by tune_deconv(). Primarily useful for examining the
effect of altering compensation or lambda.
Usage
plot_biasvar(result, subclass = 1, xvar = colnames(result)[1])
Arguments
result
Dataframe of tuning results generated by tune_deconv().
subclass
Character value specifying which cell subclass to plot, or
numeric selecting the subclass by factor level.
xvar
Character value specifying column in result to vary along the x
axis.
Value
ggplot2 line plot.
cellGeometry documentation built on April 20, 2026, 1:06 a.m.
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| plot_biasvar | R Documentation |
Plot bias-variance decomposition
Description
Produces a ggplot2 plot of total error (MSE) against bias and variance based
on results generated by tune_deconv(). Primarily useful for examining the
effect of altering compensation or lambda.
Usage
plot_biasvar(result, subclass = 1, xvar = colnames(result)[1])
Arguments
result |
Dataframe of tuning results generated by |
subclass |
Character value specifying which cell subclass to plot, or numeric selecting the subclass by factor level. |
xvar |
Character value specifying column in |
Value
ggplot2 line plot.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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