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chromoR: Analysis of chromosomal interactions data (correction, segmentation and comparison)
chromoR provides users with a statistical pipeline for analysing chromosomal interactions data (Hi-C data).It combines wavelet methods and a Bayesian approach for correction (bias and noise) and comparison (detecting significant changes between Hi-C maps) of Hi-C contact maps.In addition, it also support detection of change points in 1D Hi-C contact profiles.
Getting started
Browse package contents
Package details |
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| Author | Yoli Shavit |
| Maintainer | Yoli Shavit <ys388@cam.ac.uk> |
| License | GPL |
| Version | 1.0 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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