Man pages for chromoR
Analysis of chromosomal interactions data (correction, segmentation and comparison)

buildCIMBuilds Chromosomal Interactions Maps
chromoR-packageAnalysis of chromosomal interactions data (Hi-C data)
compareCIMCompares 2 CIMs
correctCIMCorrects a chromosomal interactions map (CIM)
correctPairCIMCorrects a pairwise CIM
imr90.1A corrected CIM of replicate 1 of IMR90, for chromosomes 1...
imr90.1.obsA non-corrected CIM of replicate 1 of IMR90, for chromosomes...
imr90.2A CIM of replicate 2 of IMR90, for chromosomes 1 and 2
segA segmentation for imr90.1 and imr90.2 CIMs
seg.imr90.obsA segmentation for imr90.1.obs CIM
segmentCIMSegments a 1D contact profile (1D CIM)
chromoR documentation built on May 30, 2017, 5:08 a.m.