chromoR: Analysis of chromosomal interactions data (correction, segmentation and comparison)
Version 1.0

chromoR provides users with a statistical pipeline for analysing chromosomal interactions data (Hi-C data).It combines wavelet methods and a Bayesian approach for correction (bias and noise) and comparison (detecting significant changes between Hi-C maps) of Hi-C contact maps.In addition, it also support detection of change points in 1D Hi-C contact profiles.

Package details

AuthorYoli Shavit
Date of publication2014-02-11 17:34:44
MaintainerYoli Shavit <[email protected]>
LicenseGPL
Version1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("chromoR")

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chromoR documentation built on May 30, 2017, 5:08 a.m.