chromoR: Analysis of chromosomal interactions data (correction, segmentation and comparison)

chromoR provides users with a statistical pipeline for analysing chromosomal interactions data (Hi-C data).It combines wavelet methods and a Bayesian approach for correction (bias and noise) and comparison (detecting significant changes between Hi-C maps) of Hi-C contact maps.In addition, it also support detection of change points in 1D Hi-C contact profiles.

Package details

AuthorYoli Shavit
MaintainerYoli Shavit <>
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:

Try the chromoR package in your browser

Any scripts or data that you put into this service are public.

chromoR documentation built on May 2, 2019, 2:05 p.m.