chromoR-package: Analysis of chromosomal interactions data (Hi-C data)

Description Details Author(s) References

Description

ChromoR combines wavelet change point with Bayes Factor, for useful correction, segmentation and comparison of Hi-C contact maps. It provides a user friendly software solution, addressing the entire statistical pipeline required for the analysis of chromosomal interactions data.

Details

Package: chromoR
Type: Package
Version: 1.0
Date: 2014-02-07
License: GPL-2

For an easy start with chromoR, check out the documentation and examples for correctCIM, compareCIM and segmentCIM

See also http://www.cl.cam.ac.uk/~ys388/chromoR/ for more examples and data sets.

Author(s)

Yoli Shavit <ys388@cam.ac.uk>

References

http://www.cl.cam.ac.uk/~ys388/chromoR/


chromoR documentation built on May 2, 2019, 2:05 p.m.