plot.mcmc: Summary plots of mcmc objects

In coda: Output Analysis and Diagnostics for MCMC

Summary plots of mcmc objects

Description

plot.mcmc summarizes an mcmc or mcmc.list object with a trace of the sampled output and a density estimate for each variable in the chain.

Usage

## S3 method for class 'mcmc'
plot(x, trace = TRUE, density = TRUE, smooth = FALSE, bwf,
	auto.layout = TRUE, ask = dev.interactive(), ...)

Arguments

x	an object of class mcmc or mcmc.list
trace	Plot trace of each variable
density	Plot density estimate of each variable
smooth	Draw a smooth line through trace plots
bwf	Bandwidth function for density plots
auto.layout	Automatically generate output format
ask	Prompt user before each page of plots
...	Further arguments

Author(s)

Martyn Plummer

See Also

densplot, traceplot.

coda documentation built on May 29, 2024, 11:23 a.m.