as_gene_symbol: Convert from most other representations of gene name to...

In crosstalkr: Analysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks

Convert from most other representations of gene name to gene.symbol

Description

Convert from most other representations of gene name to gene.symbol

Usage

as_gene_symbol(x, edb = NULL)

Arguments

x	vector of ensemble.gene ids, ensemble.peptide ids, ensemble.transcript ids or entrez gene ids
edb	ensemble database object

Value

vector of gene symbols

Examples

#1) from numeric formatted entrez id
as_gene_symbol(1956)
#2) from character formatted entrez id
as_gene_symbol("1956")
#3) from ensemble gene id
as_gene_symbol("ENSG00000146648")
#4) From a vector of entrez ids
as_gene_symbol(c("123", "1956", "2012"))

crosstalkr documentation built on Sept. 30, 2023, 1:06 a.m.