Functions for identifying, fitting, and applying continuous-space, continuous-time stochastic movement models to animal tracking data.

Author | Christen H. Fleming and J. M. Calabrese |

Date of publication | 2016-11-30 02:04:30 |

Maintainer | C. H. Fleming <flemingc@si.edu> |

License | GPL-3 |

Version | 0.3.4 |

**akde:** Calculate an autocorrelated kernel density estimate

**as.telemetry:** Import, coerce, and summarize MoveBank data

**bandwidth:** Calculate the optimal bandwidth matrix of movement data

**buffalo:** African buffalo GPS dataset from Kruger National Park, South...

**ctmm.fit:** Specify, fit, and select continuous-time movement models

**ctmm-package:** Continuous-time movement modeling

**export:** Export ctmm data formats

**gazelle:** Mongolian gazelle GPS dataset from the Mongolia's Eastern...

**homerange:** Calculate a range distribution estimate

**mean.variogram:** Compute a number-weighted average of variogram objects

**occurrence:** Calculate a Kriged occurrence disribution estimate

**overlap:** Calculate the overlap between two stationary distributions

**periodogram:** Calculate the Lomb-Scargle periodogram of animal-tracking...

**plot.telemetry:** Plotting methods for telemetry objects.

**plot.variogram:** Plotting methods for variogram objects.

**simulate.ctmm:** Predict or simulate from a continuous-time movement model

**summary.ctmm:** Summarize a continuous-time movement model

**summary.UD:** Summarize a range distribution

**uere:** Estimate UERE from calibration data

**variogram:** Calculate an empirical variogram from movement data

**variogram.fit:** Visually fit a movement model to a variogram

ctmm

ctmm/TODO

ctmm/inst

ctmm/inst/doc

ctmm/inst/doc/akde.html

ctmm/inst/doc/variogram.R

ctmm/inst/doc/akde.R

ctmm/inst/doc/akde.Rmd

ctmm/inst/doc/variogram.Rmd

ctmm/inst/doc/variogram.html

ctmm/NAMESPACE

ctmm/NEWS

ctmm/data

ctmm/data/buffalo.rda

ctmm/data/gazelle.rda

ctmm/R

ctmm/R/select.R
ctmm/R/generic.R
ctmm/R/telemetry.R
ctmm/R/variogram.R
ctmm/R/krige.R
ctmm/R/uere.R
ctmm/R/kde.R
ctmm/R/periodogram.R
ctmm/R/optim.R
ctmm/R/ctmm.R
ctmm/R/overlap.R
ctmm/R/likelihood.R
ctmm/R/mean.R
ctmm/vignettes

ctmm/vignettes/akde.Rmd

ctmm/vignettes/variogram.Rmd

ctmm/README.md

ctmm/MD5

ctmm/build

ctmm/build/vignette.rds

ctmm/DESCRIPTION

ctmm/man

ctmm/man/ctmm-package.Rd
ctmm/man/uere.Rd
ctmm/man/buffalo.Rd
ctmm/man/simulate.ctmm.Rd
ctmm/man/variogram.fit.Rd
ctmm/man/ctmm.fit.Rd
ctmm/man/occurrence.Rd
ctmm/man/overlap.Rd
ctmm/man/summary.UD.Rd
ctmm/man/bandwidth.Rd
ctmm/man/plot.telemetry.Rd
ctmm/man/akde.Rd
ctmm/man/export.Rd
ctmm/man/as.telemetry.Rd
ctmm/man/periodogram.Rd
ctmm/man/summary.ctmm.Rd
ctmm/man/variogram.Rd
ctmm/man/mean.variogram.Rd
ctmm/man/homerange.Rd
ctmm/man/gazelle.Rd
ctmm/man/plot.variogram.Rd
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