dave: Functions for "Data Analysis in Vegetation Ecology"

A collection of functions accompanying the book "Data Analysis in Vegetation Ecology", Second edition. 2013, Wiley-Blackwell, Chichester

AuthorOtto Wildi
Date of publication2014-08-05 07:49:55
MaintainerOtto Wildi <otto.wildi@wsl.ch>
LicenseLGPL (>= 2.0)
Version1.5

View on CRAN

Man pages

aocc: Analysis of concentration (AOC)

ccost: Cost function of 2 alternative classifications of rows in...

centroid: Centroids of row groups (vegetation releves)

dave-package: Data Analysis in Vegetation Ecology

davesil: Modified version of silhouette plotting

dircor: Directional mantel correlation

EKs: Swiss forest vegetation data base 1972, site information

EKv: Swiss forest vegetation data base 1972, vegetation...

fitmarkov: Approximating a Markov chain

fspa: Flexible shortest path adjustment

ltim: Lippe et al. 1985 data set, yr of observation

lveg: Lippe et al. 1985 data set, vegetation data

Mtabs: Structuring vegetation data tables

mveg: Ellenberg's 1956 meadow data

mxplot: Matrixplot of groups similarities

nsit: European beach forest data, site factors

nveg: European beach forest data, vegetation

orank: Ranking by orthogonal components (RANK)

outlier: Outlier detection

overly: Overly of multivariate time series

pcaser: Connecting time series in ordinations

pcobiplot: Computing and plotting a biplot ordination using principal...

pcovar: Plotting 6 variants of principal coordinates analysis

psit: Time scale (yr) for Soppensee pollen data

pveg: Soppensee pollen data

sn59sit: Time series from the Swiss National Park, 59 plots. Site...

sn59veg: Time series from the Swiss National Park, 59 plots....

sn6sit: Time series from the Swiss National Park, 6 plots. Site data.

sn6veg: Time series from the Swiss National Park, 6 plots. Vegetation...

SNPsm: The spatial and temporal model of succession in the Swiss...

SNPtm: The temporal model of succession in the Swiss National Park

speedprof: Plotting velocity profiles of multivariate time series

srank: Ranking species by IndVal or F-value

ssind: Indicator values of all species in data set "sveg"

ssit: Schlaenggli site data

sspft: Selected plant functional traits of all species in data set...

sveg: Schlaenggli vegetation data

tsit: Time series from the Swiss National Park, Plot Tr6. Site...

tveg: Time series from the Swiss National Park, Plot Tr6....

vvelocity: Printing ordinations of velocity and acceleration and...

wetsit: Random sample of Swiss wetland vegetation, site information.

wetveg: Random sample of Swiss wetland vegetation, vegetation...

ws200: Four kilometre grid forest data of Switzerland, 200m2 plots

ws30: Four kilometre grid forest data of Switzerland, 30m2 plots

ws500: Four kilometre grid forest data of Switzerland, 500m2 plots

wssit: Four kilometre grid forest data of Switzerland, site...

Files in this package

dave
dave/NAMESPACE
dave/data
dave/data/sspft.rda
dave/data/wetsit.rda
dave/data/tveg.rda
dave/data/ltim.rda
dave/data/ssit.rda
dave/data/sn59veg.rda
dave/data/mveg.rda
dave/data/EKs.rda
dave/data/ws30.rda
dave/data/wetveg.rda
dave/data/ws200.rda
dave/data/ws500.rda
dave/data/lveg.rda
dave/data/sn6sit.rda
dave/data/pveg.rda
dave/data/sn59sit.rda
dave/data/EKv.rda
dave/data/nveg.rda
dave/data/psit.rda
dave/data/sn6veg.rda
dave/data/tsit.rda
dave/data/ssind.rda
dave/data/nsit.rda
dave/data/sveg.rda
dave/data/wssit.rda
dave/R
dave/R/pcovar.R dave/R/plot.overly.R dave/R/SNPtm2.R dave/R/dircor.R dave/R/plot.SNPsm.R dave/R/fspa2.R dave/R/plot.vvelocity.R dave/R/mxplot.R dave/R/plot.SNPtm.R dave/R/vvelocity.R dave/R/fspa.R dave/R/outlier.R dave/R/orank.R dave/R/plot.speedprof.R dave/R/plot.aocc.R dave/R/ccost.R dave/R/summary.Mtabs.R dave/R/SNPsm.R dave/R/pcobiplot.R dave/R/centroid.default.R dave/R/setgroupsize.R dave/R/rfitmarkov.R dave/R/SNPtm.default.R dave/R/plot.outlier.R dave/R/pcoatest.R dave/R/srank2.R dave/R/plot.dircor.R dave/R/SNPtm.R dave/R/Mtabs.default.R dave/R/pcaser.R dave/R/plot.mxplot.R dave/R/mtab.R dave/R/SNPsm.default.R dave/R/vvelocity.default.R dave/R/ccost.default.R dave/R/plot.pcobiplot.R dave/R/plot.orank.R dave/R/plot.fitmarkov.R dave/R/davesil.R dave/R/fitmarkov.R dave/R/speedprof2.R dave/R/rcentroid.R dave/R/dircor2.R dave/R/orank.default.R dave/R/pcocoor.R dave/R/davesil.default.R dave/R/plot.davesil.R dave/R/pcovar.default.R dave/R/plot.fspa.R dave/R/plot.pcaser.R dave/R/ccost2.R dave/R/print.ccost.R dave/R/matrixplot.R dave/R/fitmarkov.default.R dave/R/pcaser2.R dave/R/aoc.R dave/R/srank.R dave/R/Mtabs.R dave/R/aocc.R dave/R/summary.orank.R dave/R/mxplot.default.R dave/R/dircor.default.R dave/R/speedprof.R dave/R/centroid.R dave/R/outlier.default.R dave/R/pcaser.default.R dave/R/overly.default.R dave/R/srank.default.R dave/R/speedprof.default.R dave/R/plottab.R dave/R/fspa.default.R dave/R/orank1.R dave/R/outly.R dave/R/aocc.default.R dave/R/print.outlier.R dave/R/SNPsm2.R dave/R/dsil.R dave/R/overly2.R dave/R/plot.Mtabs.R dave/R/plottabl.R dave/R/pcobiplot.default.R dave/R/vvelocity2.R dave/R/plot.pcovar.R dave/R/print.srank.R dave/R/overly.R dave/R/print.centroid.R
dave/MD5
dave/DESCRIPTION
dave/man
dave/man/pcobiplot.Rd dave/man/wetsit.Rd dave/man/orank.Rd dave/man/mveg.Rd dave/man/sn59veg.Rd dave/man/srank.Rd dave/man/ws30.Rd dave/man/aocc.Rd dave/man/SNPsm.Rd dave/man/ltim.Rd dave/man/fspa.Rd dave/man/sveg.Rd dave/man/sn6veg.Rd dave/man/vvelocity.Rd dave/man/EKs.Rd dave/man/lveg.Rd dave/man/ssit.Rd dave/man/wetveg.Rd dave/man/ccost.Rd dave/man/psit.Rd dave/man/ws500.Rd dave/man/Mtabs.Rd dave/man/outlier.Rd dave/man/speedprof.Rd dave/man/nveg.Rd dave/man/sn6sit.Rd dave/man/SNPtm.Rd dave/man/ws200.Rd dave/man/overly.Rd dave/man/tveg.Rd dave/man/ssind.Rd dave/man/tsit.Rd dave/man/mxplot.Rd dave/man/davesil.Rd dave/man/dircor.Rd dave/man/pcovar.Rd dave/man/pveg.Rd dave/man/wssit.Rd dave/man/pcaser.Rd dave/man/dave-package.Rd dave/man/EKv.Rd dave/man/sspft.Rd dave/man/centroid.Rd dave/man/nsit.Rd dave/man/sn59sit.Rd dave/man/fitmarkov.Rd

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