sveg: Schlaenggli vegetation data
Description Usage Format Source References Examples
Description
Schlaenggli vegetation data. 63 plots arranged in a square grid. Site factors in data frame ssit.
Usage
1 |
Format
A data frame with 63 observations on 119 species as variables. Species abundance measured on a 0 to 6 scale.
Source
Wildi, O. 1977. Beschreibung exzentrischer Hochmoore mit Hilfe quantitativer Methoden. Veroeff. Geobot. Inst. ETH, Stiftung Ruebel 60: 128S.
References
Wildi, O. 2017. Data Analysis in Vegetation Ecology. 3rd ed. CABI, Oxfordshire, Boston.
Examples
1 | |
Example output
Loading required package: cluster
Loading required package: labdsv
Loading required package: mgcv
Loading required package: nlme
This is mgcv 1.8-33. For overview type 'help("mgcv-package")'.
This is labdsv 2.0-1
convert existing ordinations with as.dsvord()
Attaching package: ‘labdsv’
The following object is masked from ‘package:stats’:
density
Loading required package: vegan
Loading required package: permute
Loading required package: lattice
This is vegan 2.5-7
Loading required package: nnet
Attaching package: ‘nnet’
The following object is masked from ‘package:mgcv’:
multinom
Loading required package: tree
Vaccinium.myrtillus Vaccinium.uliginosum Vaccinium.oxycoccos Calluna.vulgaris
Min. :0.0000 Min. :0.0000 Min. :0.0000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000
Median :0.0000 Median :0.0000 Median :0.0000 Median :0.0000
Mean :0.1905 Mean :0.2063 Mean :0.5079 Mean :0.3333
3rd Qu.:0.0000 3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:1.0000
Max. :1.0000 Max. :2.0000 Max. :2.0000 Max. :3.0000
Carex.rostrata Carex.lasiocarpa Carex.nigra Carex.davalliana
Min. :0.00000 Min. :0.0000 Min. :0.0000 Min. :0.0000
1st Qu.:0.00000 1st Qu.:1.0000 1st Qu.:0.0000 1st Qu.:0.0000
Median :0.00000 Median :1.0000 Median :1.0000 Median :0.0000
Mean :0.07937 Mean :0.9365 Mean :0.6667 Mean :0.4444
3rd Qu.:0.00000 3rd Qu.:1.0000 3rd Qu.:1.0000 3rd Qu.:1.0000
Max. :2.00000 Max. :2.0000 Max. :2.0000 Max. :2.0000
Carex.hostiana Carex.pauciflora Carex.echinata Carex.panicea
Min. :0.0000 Min. :0.00000 Min. :0.000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:0.00000 1st Qu.:0.500 1st Qu.:0.0000
Median :0.0000 Median :0.00000 Median :1.000 Median :1.0000
Mean :0.2698 Mean :0.03175 Mean :1.317 Mean :0.6349
3rd Qu.:0.0000 3rd Qu.:0.00000 3rd Qu.:2.000 3rd Qu.:1.0000
Max. :2.0000 Max. :1.00000 Max. :3.000 Max. :2.0000
Trichophorum.caespitosum Trichophorum.alpinum Eriophorum.vaginatum
Min. :0.000 Min. :0.0000 Min. :0.0000
1st Qu.:1.000 1st Qu.:0.0000 1st Qu.:0.0000
Median :1.000 Median :0.0000 Median :0.0000
Mean :1.413 Mean :0.4762 Mean :0.1587
3rd Qu.:2.000 3rd Qu.:1.0000 3rd Qu.:0.0000
Max. :3.000 Max. :2.0000 Max. :2.0000
Eriophorum.latifolium Eriophorum.angustifolium Tofieldia.calyculata
Min. :0.000 Min. :0.0000 Min. :0.0000
1st Qu.:0.000 1st Qu.:1.0000 1st Qu.:0.0000
Median :0.000 Median :1.0000 Median :0.0000
Mean :0.254 Mean :0.8413 Mean :0.3968
3rd Qu.:0.000 3rd Qu.:1.0000 3rd Qu.:1.0000
Max. :2.000 Max. :2.0000 Max. :1.0000
Pinguicula.vulgaris Parnassia.palustris Rhynchospora.alba Drosera.rotundifolia
Min. :0.000 Min. :0.0000 Min. :0.00000 Min. :0.0000
1st Qu.:0.000 1st Qu.:0.0000 1st Qu.:0.00000 1st Qu.:0.0000
Median :0.000 Median :0.0000 Median :0.00000 Median :1.0000
Mean :0.381 Mean :0.3968 Mean :0.03175 Mean :0.8095
3rd Qu.:1.000 3rd Qu.:1.0000 3rd Qu.:0.00000 3rd Qu.:1.0000
Max. :2.000 Max. :1.0000 Max. :1.00000 Max. :2.0000
Arnica.montana Dactylorhiza.maculata Polytrichum.strictum Succisa.pratensis
Min. :0.0000 Min. :0.000 Min. :0.0000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:0.000 1st Qu.:0.0000 1st Qu.:0.0000
Median :0.0000 Median :1.000 Median :0.0000 Median :1.0000
Mean :0.6984 Mean :0.746 Mean :0.4127 Mean :0.7143
3rd Qu.:1.0000 3rd Qu.:1.000 3rd Qu.:1.0000 3rd Qu.:1.0000
Max. :3.0000 Max. :2.000 Max. :3.0000 Max. :1.0000
Anthoxanthum.odoratum Molinia.caerulea Gentiana.asclepiadea Luzula.multiflora
Min. :0.0000 Min. :0.00 Min. :0.0000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:1.00 1st Qu.:1.0000 1st Qu.:0.0000
Median :1.0000 Median :1.00 Median :1.0000 Median :0.0000
Mean :0.6349 Mean :1.19 Mean :0.7937 Mean :0.1905
3rd Qu.:1.0000 3rd Qu.:1.00 3rd Qu.:1.0000 3rd Qu.:0.0000
Max. :1.0000 Max. :2.00 Max. :2.0000 Max. :1.0000
Festuca.rubra Potentilla.erecta Sphagnum.magellanicum Sphagnum.papillosum
Min. :0.0000 Min. :0.000 Min. :0.000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:1.000 1st Qu.:0.000 1st Qu.:0.0000
Median :1.0000 Median :1.000 Median :1.000 Median :1.0000
Mean :0.5397 Mean :1.286 Mean :1.016 Mean :0.9206
3rd Qu.:1.0000 3rd Qu.:2.000 3rd Qu.:1.000 3rd Qu.:1.0000
Max. :1.0000 Max. :2.000 Max. :5.000 Max. :5.0000
Equisetum.palustre Aulacomnium.palustre Euphrasia.rostkoviana Nardus.stricta
Min. :0.000 Min. :0.000 Min. :0.0000 Min. :0.0000
1st Qu.:1.000 1st Qu.:1.000 1st Qu.:0.0000 1st Qu.:0.0000
Median :1.000 Median :1.000 Median :0.0000 Median :1.0000
Mean :1.079 Mean :1.095 Mean :0.3968 Mean :0.6349
3rd Qu.:1.000 3rd Qu.:1.000 3rd Qu.:1.0000 3rd Qu.:1.0000
Max. :3.000 Max. :3.000 Max. :2.0000 Max. :2.0000
Carex.pulicaris Climacium.dendroides Carex.pallescens Carex.lepidocarpa
Min. :0.000 Min. :0.0000 Min. :0.0000 Min. :0.000
1st Qu.:0.000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.000
Median :0.000 Median :0.0000 Median :0.0000 Median :0.000
Mean :0.381 Mean :0.5397 Mean :0.1746 Mean :0.127
3rd Qu.:1.000 3rd Qu.:1.0000 3rd Qu.:0.0000 3rd Qu.:0.000
Max. :2.000 Max. :3.0000 Max. :1.0000 Max. :1.000
Briza.media Sphagnum.platyphyllum Sphagnum.tenellum Sphagnum.recurvum
Min. :0.000 Min. :0.0000 Min. :0.00000 Min. :0.000
1st Qu.:0.000 1st Qu.:0.0000 1st Qu.:0.00000 1st Qu.:0.000
Median :0.000 Median :0.0000 Median :0.00000 Median :1.000
Mean :0.381 Mean :0.2381 Mean :0.06349 Mean :1.571
3rd Qu.:1.000 3rd Qu.:0.0000 3rd Qu.:0.00000 3rd Qu.:2.500
Max. :1.000 Max. :3.0000 Max. :1.00000 Max. :6.000
Sphagnum.rubellum Sphagnum.centrale Sphagnum.subsecundum
Min. :0.000 Min. :0.00000 Min. :0.0000
1st Qu.:0.000 1st Qu.:0.00000 1st Qu.:0.0000
Median :1.000 Median :0.00000 Median :0.0000
Mean :1.222 Mean :0.03175 Mean :0.8254
3rd Qu.:2.000 3rd Qu.:0.00000 3rd Qu.:1.0000
Max. :6.000 Max. :1.00000 Max. :6.0000
Juncus.alpinoarticulatus Solidago.virgaurea Agrostis.canina Juncus.effusus
Min. :0.0000 Min. :0.0000 Min. :0.0000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000
Median :0.0000 Median :0.0000 Median :0.0000 Median :0.0000
Mean :0.2857 Mean :0.2381 Mean :0.3968 Mean :0.1429
3rd Qu.:1.0000 3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:0.0000
Max. :1.0000 Max. :2.0000 Max. :1.0000 Max. :1.0000
Frangula.alnus Anemone.nemorosa Holcus.lanatus Drepanocladus.exannulatus
Min. :0.0000 Min. :0.0000 Min. :0.0000 Min. :0.00000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.00000
Median :0.0000 Median :1.0000 Median :0.0000 Median :0.00000
Mean :0.4921 Mean :0.6032 Mean :0.2063 Mean :0.04762
3rd Qu.:1.0000 3rd Qu.:1.0000 3rd Qu.:0.0000 3rd Qu.:0.00000
Max. :2.0000 Max. :2.0000 Max. :1.0000 Max. :1.00000
Homogyne.alpina Polygala.vulgaris Trollius.europaeus Polygonum.bistorta
Min. :0.00000 Min. :0.0000 Min. :0.0000 Min. :0.00000
1st Qu.:0.00000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.00000
Median :0.00000 Median :0.0000 Median :0.0000 Median :0.00000
Mean :0.04762 Mean :0.1905 Mean :0.3333 Mean :0.06349
3rd Qu.:0.00000 3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:0.00000
Max. :2.00000 Max. :1.0000 Max. :1.0000 Max. :2.00000
Lotus.pedunculatus Trifolium.pratense Taraxacum.palustre Campylium.stellatum
Min. :0.00000 Min. :0.0000 Min. :0.0000 Min. :0.0000
1st Qu.:0.00000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000
Median :0.00000 Median :0.0000 Median :0.0000 Median :0.0000
Mean :0.06349 Mean :0.2063 Mean :0.3333 Mean :0.5079
3rd Qu.:0.00000 3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:1.0000
Max. :2.00000 Max. :1.0000 Max. :1.0000 Max. :5.0000
Cirsium.palustre Lysimachia.vulgaris Maianthemum.bifolium Equisetum.sylvaticum
Min. :0.0000 Min. :0.0000 Min. :0.000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.000 1st Qu.:0.0000
Median :0.0000 Median :0.0000 Median :1.000 Median :0.0000
Mean :0.1429 Mean :0.4603 Mean :0.619 Mean :0.1587
3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:1.000 3rd Qu.:0.0000
Max. :1.0000 Max. :1.0000 Max. :2.000 Max. :1.0000
Centaurea.jacea Prunella.grandiflora Viola.palustris Angelica.sylvestris
Min. :0.0000 Min. :0.0000 Min. :0.0000 Min. :0.00000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.00000
Median :0.0000 Median :0.0000 Median :0.0000 Median :0.00000
Mean :0.2857 Mean :0.2063 Mean :0.3333 Mean :0.03175
3rd Qu.:0.5000 3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:0.00000
Max. :2.0000 Max. :1.0000 Max. :2.0000 Max. :1.00000
Filipendula.ulmaria Thuidium.delicatulum Sanguisorba.officinalis
Min. :0.0000 Min. :0.0000 Min. :0.00000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.00000
Median :0.0000 Median :1.0000 Median :0.00000
Mean :0.1111 Mean :0.6508 Mean :0.04762
3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:0.00000
Max. :2.0000 Max. :4.0000 Max. :1.00000
Galium.uliginosum Epipactis.palustris Pleurozium.schreberi
Min. :0.0000 Min. :0.0000 Min. :0.000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.000
Median :0.0000 Median :0.0000 Median :0.000
Mean :0.2857 Mean :0.1905 Mean :0.619
3rd Qu.:1.0000 3rd Qu.:0.0000 3rd Qu.:1.000
Max. :1.0000 Max. :1.0000 Max. :6.000
Calliergon.stramineum Aster.bellidiastrum Hypnum.bambergeri
Min. :0.000 Min. :0.0000 Min. :0.0000
1st Qu.:0.000 1st Qu.:0.0000 1st Qu.:0.0000
Median :1.000 Median :0.0000 Median :0.0000
Mean :0.619 Mean :0.2698 Mean :0.4762
3rd Qu.:1.000 3rd Qu.:0.0000 3rd Qu.:1.0000
Max. :2.000 Max. :2.0000 Max. :5.0000
Drepanocladus.revolvens Dicranum.bonjeanii Dicranum.scoparium
Min. :0.0000 Min. :0.0000 Min. :0.00000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.00000
Median :0.0000 Median :0.0000 Median :0.00000
Mean :0.1587 Mean :0.4127 Mean :0.07937
3rd Qu.:0.0000 3rd Qu.:1.0000 3rd Qu.:0.00000
Max. :3.0000 Max. :1.0000 Max. :1.00000
Hylocomium.splendens Rhytidiadelphus.squarrosus Calliergonella.cuspidata
Min. :0.000 Min. :0.0000 Min. :0.000
1st Qu.:0.000 1st Qu.:0.0000 1st Qu.:0.000
Median :1.000 Median :0.0000 Median :0.000
Mean :1.063 Mean :0.4444 Mean :0.127
3rd Qu.:1.000 3rd Qu.:1.0000 3rd Qu.:0.000
Max. :5.000 Max. :2.0000 Max. :1.000
Fissidens.adianthoides Primula.veris Primula.farinosa Hieracium.lachenalii
Min. :0.000 Min. :0.000 Min. :0.00000 Min. :0.0000
1st Qu.:0.000 1st Qu.:0.000 1st Qu.:0.00000 1st Qu.:0.0000
Median :0.000 Median :0.000 Median :0.00000 Median :1.0000
Mean :0.127 Mean :0.127 Mean :0.09524 Mean :0.6508
3rd Qu.:0.000 3rd Qu.:0.000 3rd Qu.:0.00000 3rd Qu.:1.0000
Max. :1.000 Max. :1.000 Max. :1.00000 Max. :1.0000
Crepis.paludosa Leontodon.hispidus Lotus.corniculatus Stachys.officinalis
Min. :0.0000 Min. :0.0000 Min. :0.0000 Min. :0.0000
1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000 1st Qu.:0.0000
Median :0.0000 Median :0.0000 Median :0.0000 Median :0.0000
Mean :0.2381 Mean :0.2063 Mean :0.1905 Mean :0.1587
3rd Qu.:0.0000 3rd Qu.:0.0000 3rd Qu.:0.0000 3rd Qu.:0.0000
Max. :1.0000 Max. :1.0000 Max. :1.0000 Max. :1.0000
Carex.flacca Gentiana.verna Geranium.sylvaticum Ranunculus.nemorosus
Min. :0.0000 Min. :0.00000 Min. :0.00000 Min. :0.000
1st Qu.:0.0000 1st Qu.:0.00000 1st Qu.:0.00000 1st Qu.:0.000
Median :0.0000 Median :0.00000 Median :0.00000 Median :0.000
Mean :0.1111 Mean :0.03175 Mean :0.04762 Mean :0.381
3rd Qu.:0.0000 3rd Qu.:0.00000 3rd Qu.:0.00000 3rd Qu.:1.000
Max. :1.0000 Max. :1.00000 Max. :1.00000 Max. :1.000
Linum.catharticum Cirsium.oleraceum Colchicum.autumnale Polygala.amarella
Min. :0.000 Min. :0.00000 Min. :0.00000 Min. :0.00000
1st Qu.:0.000 1st Qu.:0.00000 1st Qu.:0.00000 1st Qu.:0.00000
Median :0.000 Median :0.00000 Median :0.00000 Median :0.00000
Mean :0.127 Mean :0.03175 Mean :0.03175 Mean :0.04762
3rd Qu.:0.000 3rd Qu.:0.00000 3rd Qu.:0.00000 3rd Qu.:0.00000
Max. :1.000 Max. :1.00000 Max. :1.00000 Max. :1.00000
Polygala.serpyllifolia Equisetum.arvense Deschampsia.cespitosa
Min. :0.00000 Min. :0.0000 Min. :0.00000
1st Qu.:0.00000 1st Qu.:0.0000 1st Qu.:0.00000
Median :0.00000 Median :0.0000 Median :0.00000
Mean :0.03175 Mean :0.2063 Mean :0.06349
3rd Qu.:0.00000 3rd Qu.:0.0000 3rd Qu.:0.00000
Max. :1.00000 Max. :1.0000 Max. :1.00000
Rhinanthus.minor Gymnadenia.conopsea Melampyrum.pratense Salix.spec.
Min. :0.00000 Min. :0.0000 Min. :0.00000 Min. :0.00000
1st Qu.:0.00000 1st Qu.:0.0000 1st Qu.:0.00000 1st Qu.:0.00000
Median :0.00000 Median :0.0000 Median :0.00000 Median :0.00000
Mean :0.06349 Mean :0.1429 Mean :0.03175 Mean :0.03175
3rd Qu.:0.00000 3rd Qu.:0.0000 3rd Qu.:0.00000 3rd Qu.:0.00000
Max. :1.00000 Max. :1.0000 Max. :1.00000 Max. :1.00000
Caltha.palustris Dactylorhiza.fistulosa Platanthera.bifolia
Min. :0.00000 Min. :0.00000 Min. :0.00000
1st Qu.:0.00000 1st Qu.:0.00000 1st Qu.:0.00000
Median :0.00000 Median :0.00000 Median :0.00000
Mean :0.04762 Mean :0.06349 Mean :0.09524
3rd Qu.:0.00000 3rd Qu.:0.00000 3rd Qu.:0.00000
Max. :1.00000 Max. :1.00000 Max. :1.00000
Acer.pseudoplatanus Danthonia.decumbens Drepanocladus.spec. Tomentypnum.nitens
Min. :0.00000 Min. :0.00000 Min. :0.00000 Min. :0.00000
1st Qu.:0.00000 1st Qu.:0.00000 1st Qu.:0.00000 1st Qu.:0.00000
Median :0.00000 Median :0.00000 Median :0.00000 Median :0.00000
Mean :0.06349 Mean :0.06349 Mean :0.03175 Mean :0.03175
3rd Qu.:0.00000 3rd Qu.:0.00000 3rd Qu.:0.00000 3rd Qu.:0.00000
Max. :1.00000 Max. :1.00000 Max. :1.00000 Max. :1.00000
Ctenidium.molluscum
Min. :0.00000
1st Qu.:0.00000
Median :0.00000
Mean :0.03175
3rd Qu.:0.00000
Max. :1.00000
