Description Usage Arguments Value Author(s) Examples
Report metadata for a specified substance from a specified database, and plot the data.
1 2 3 4 5 6 | checksubstance(substance,
db = c("cytotox", "enzymes", "ecotox"),
experimentator = "%",
celltype = "%", enzymetype = "%", organism = "%",
endpoint = "%",
whereClause = "1", ok = "%")
|
substance |
The name of the substance identifying it within the database. Matching is not case-sensitive. |
db |
The database to be used. Currently, the databases "cytotox" and "enzymes" of the UFT Department of Bioorganic Chemistry are supported (default is "cytotox"). |
experimentator |
The name of the experimentator whose data is to be used. Default is "%", which means that data from all experimentators are shown. |
celltype |
Currently, only data for IPC-81, C6, NB4, HeLa, Jurkat and U937 are supported. Default is "%", i.e. data for any cell type will be displayed. |
enzymetype |
Currently, only data for AChE, GR and GST are supported. The default value is "%", i.e. data for any enzyme type will be displayed. |
organism |
The latin name of the tested organism, if the ecotox db was selected. The default value is "%", i.e. data for any organism will be displayed. |
endpoint |
The endpoint that should be used for selecting the data. Only important if the database "ecotox" is used. Defaults to "%". |
whereClause |
With this argument, additional conditions for the SQL query can be set, e.g. "plate != 710". The default is 1 (in SQL syntax this means TRUE). |
ok |
With the default value "%", all data in the database is retrieved for the specified substance. |
The function lists a report and shows one graph.
Johannes Ranke jranke@uni-bremen.de
1 2 | # Check substance IM14 BF4 in the cytotox database
## Not run: checksubstance("IM14 BF4")
|
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