API for epinetr
Epistatic Network Modelling with Forward-Time Simulation

Global functions
Population	Man page Source code
addBroadH2	Source code
addEffects	Man page Source code
addHaplotypes	Source code
addMap	Source code
addNarrowh2	Source code
addPopSize	Source code
addQTL	Source code
addSex	Source code
addVariances	Source code
attachEpiNet	Man page Source code
buildNetwork	Source code
calcAF	Source code
calcEpiScale	Source code
constructEpiNet	Source code
cullIndices	Source code
epinetr	Man page
estEffects	Source code
fitRnd	Source code
generateHap	Source code
geno100snp	Man page
geno2hap	Source code Source code
getAddCoefs	Man page Source code
getAddOffset	Man page Source code
getAlleleFreqRun	Man page Source code
getComponents	Man page Source code
getEpi	Source code
getEpiNet	Man page Source code
getEpiOffset	Man page Source code
getEpistasis	Man page Source code
getFilename	Source code
getGeno	Man page Source code
getHaplo	Man page Source code
getIncMatrix	Man page Source code
getInteraction	Man page Source code
getMales	Source code
getPedigree	Man page Source code
getPhased	Man page Source code
getPheno	Source code
getQTL	Man page Source code
getRecProb	Source code
getSeeds	Source code
getSerialMat	Source code
getSubPop	Man page Source code
hap2geno	Source code
hapLogic	Source code
loadGeno	Man page Source code
map100snp	Man page
normalisedrnorm	Source code
plot.EpiNet	Man page Source code
plot.Population	Man page Source code
prepPed	Source code
prepPop	Source code
print.Population	Man page Source code
ranking	Source code
readVCF	Source code
recMask	Source code
recombine	Source code
rincmat100snp	Man page
rn	Source code
rng	Source code
runSim	Man page Source code
selectSeeds	Source code
serialMat	Source code
sortMap	Source code
sortPed	Source code
splitMatrix	Source code
testPop	Source code
updatePedigree	Source code
userNetwork	Source code