RawDataParameters-class: Class '"RawDataParameters"'

In erah: Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics

Description

The RawDataParameters class contains the slots for storing and accessing into a MS sample, and the essential parameters for performing its processing (deconvolution).

Slots

data:

The data matrix of the sample to be processed

min.mz:

The minimum adquired mz number

max.mz:

The maximum adquired mz number

start.time:

Starting time of adquisition

mz.resolution:

Mz resolution

scans.per.second:

Scans per second

avoid.processing.mz:

Which mz do not have to be processed

min.peak.width:

Minimum peak width (stored in scans)

min.peak.height:

Minimum peak height

noise.threshold:

The noise threshold

compression.coef:

Compression coefficient (parameter for Orthogonal Signal Deconvolution)

Author(s)

Xavier Domingo-Almenara.

erah documentation built on May 11, 2021, 9:11 a.m.