RawDataParameters-class: Class '"RawDataParameters"'

In erah: Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics

Class "RawDataParameters"

Description

The RawDataParameters class contains the slots for storing and accessing into a MS sample, and the essential parameters for performing its processing (deconvolution).

Slots

data

The data matrix of the sample to be processed

min.mz

The minimum adquired mz number

max.mz

The maximum adquired mz number

start.time

Starting time of adquisition

mz.resolution

Mz resolution

scans.per.second

Scans per second

avoid.processing.mz

Which mz do not have to be processed

min.peak.width

Minimum peak width (stored in scans)

min.peak.height

Minimum peak height

noise.threshold

The noise threshold

compression.coef

Compression coefficient (parameter for Orthogonal Signal Deconvolution)

Author(s)

Xavier Domingo-Almenara.

erah documentation built on June 22, 2024, 11:01 a.m.