A simple package for Flux Balance Analysis and related metabolic modeling techniques. Functions are provided for: parsing models in tabular format, converting parsed metabolic models to input formats for common linear programming solvers, and evaluating and applying geneproteinreaction mappings. In addition, there are wrappers to parse a model, select a solver, find the metabolic fluxes, and return the results applied to the original model. Compared to other packages in this field, this package puts a much heavier focus on providing reusable components that can be used in the design of new implementation of new techniques, in particular those that involve large parameter sweeps.
Package details 


Author  Max Conway [aut, cre] 
Date of publication  20180404 03:38:26 UTC 
Maintainer  Max Conway <[email protected]> 
License  GPL3 
Version  0.4.3 
URL  http://maxconway.github.io/fbar/ https://github.com/maxconway/fbar 
Package repository  View on CRAN 
Installation 
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