iJO1366: A full size E. coli model.
In fbar: An Extensible Approach to Flux Balance Analysis
Description
Usage
Format
Source
Description
A full size E. coli model.
Usage
1
Format
A data frame with 2,583 rows and 10 columns:
- abbreviation
an abbreviated reaction name, acts as the reaction id
- lowbnd
lower bound on the reaction rate
- uppbnd
upper bound on the reaction rate
- obj_coef
identifies a reaction (or reactions) for which the maximum possible rate should be found
- equation
reaction equation
- officialName
full reaction name
- geneAssociation
A boolean combination of genes which control the reaction
- subsystem
an indicator of reaction function
Source
http://bigg.ucsd.edu, A comprehensive genome-scale reconstruction of Escherichia coli metabolism–2011.
fbar documentation built on Sept. 2, 2020, 5:08 p.m.
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Description Usage Format Source
Description
A full size E. coli model.
Usage
1 |
Format
A data frame with 2,583 rows and 10 columns:
- abbreviation
an abbreviated reaction name, acts as the reaction id
- lowbnd
lower bound on the reaction rate
- uppbnd
upper bound on the reaction rate
- obj_coef
identifies a reaction (or reactions) for which the maximum possible rate should be found
- equation
reaction equation
- officialName
full reaction name
- geneAssociation
A boolean combination of genes which control the reaction
- subsystem
an indicator of reaction function
Source
http://bigg.ucsd.edu, A comprehensive genome-scale reconstruction of Escherichia coli metabolism–2011.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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