Nothing
#' @importFrom graphics plot
#' @export
plot.fdawarp <- function(x, ...){
M <- nrow(x$fn)
mean_f0 <- rowMeans(x$f0)
std_f0 <- apply(x$f0, 1, stats::sd)
mean_fn <- rowMeans(x$fn)
std_fn <- apply(x$fn, 1, stats::sd)
graphics::matplot(
x = (0:(M - 1)) / (M - 1),
y = x$warping_functions,
type = "l",
main = "Warping functions",
xlab = "Time"
)
graphics::matplot(
x = x$time,
y = x$fn,
type = "l",
main = bquote(paste("Warped Data (", lambda == .(x$lambda), ")"))
)
graphics::matplot(
x = x$time,
y = cbind(mean_f0, mean_f0 + std_f0, mean_f0 - std_f0),
type = "l",
lty = 1,
col = c("blue", "red", "green"),
ylab = "",
main = bquote(paste("Original Data: ", Mean %+-% STD))
)
graphics::legend(
x = "topright",
inset = 0.01,
legend = c("Mean", "Mean + STD", "Mean - STD"),
col = c("blue", "red", "green"),
lty = 1
)
graphics::matplot(
x = x$time,
y = cbind(mean_fn, mean_fn + std_fn, mean_fn - std_fn),
type = "l",
lty = 1,
col = c("blue", "red", "green"),
ylab = "",
main = bquote(paste(
"Warped Data: ", Mean %+-% STD,
" (", lambda == .(x$lambda), ")"
))
)
graphics::legend(
x = "topright",
inset = 0.01,
legend = c("Mean", "Mean + STD", "Mean - STD"),
col = c("blue", "red", "green"),
lty = 1
)
if (x$call$centroid_type == "mean")
plot(
x = x$time,
y = x$fmean,
type = "l",
col = "green",
main = bquote(paste(f[mean], " (", lambda == .(x$call$lambda), ")"))
)
else
plot(
x = x$time,
y = x$fmean,
type = "l",
col = "green",
main = bquote(paste(f[median], " (", lambda == .(x$call$lambda), ")"))
)
}
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