fsts.theta: Example fst calculations from a genepop file.
In fsthet: Fst-Heterozygosity Smoothed Quantiles
Description
Usage
Format
Source
References
Description
Example fst calculations using theta (fst.choice="theta") from a genepop file.
The original data were generated by using a numerical analysis with Nm = 10, 75 demes, and 5 population samples taken. No selection was imposed.
The fsts were calculated using calc.actual.fst(gpop,fst.choice="theta")
This file contains a dataframe with 2000 columns and 3 rows. The first column is the Locus ID, the second column is the Ht for that locus, and the third column is the Fst for that locus.
Usage
1
Format
data.frame
Source
Generated by numerical analysis
References
See Flanagan & Jones
fsthet documentation built on May 2, 2019, 7:55 a.m.
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Description Usage Format Source References
Description
Example fst calculations using theta (fst.choice="theta") from a genepop file. The original data were generated by using a numerical analysis with Nm = 10, 75 demes, and 5 population samples taken. No selection was imposed. The fsts were calculated using calc.actual.fst(gpop,fst.choice="theta") This file contains a dataframe with 2000 columns and 3 rows. The first column is the Locus ID, the second column is the Ht for that locus, and the third column is the Fst for that locus.
Usage
1 |
Format
data.frame
Source
Generated by numerical analysis
References
See Flanagan & Jones
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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