my.read.genepop: This reads a genepop file into R

In fsthet: Fst-Heterozygosity Smoothed Quantiles

Description

This reads a genepop file into R. It was adapted from a similar functionin adegenet.

Usage

my.read.genepop(file, ncode = 2L, quiet = FALSE)

Arguments

file	is the filename of the genpop file.
quiet	If quiet = FALSE updates will be printed. If quiet = T status updates will not be printed.
ncode	Do not change this argument.

Value

res	A dataframe with the Population ID in column 1, the Individual ID in column 2, and the genotypes in columns following that. There is one row per individual.

References

http://adegenet.r-forge.r-project.org/

Examples

  gfile<-system.file("extdata", "example.genepop.txt",package = 'fsthet')
  gpop<-my.read.genepop(gfile)
  

fsthet documentation built on May 2, 2019, 7:55 a.m.