readASAdir: Read Directory of Accessible Solvent accessibility predicted...
In ftrCOOL: Feature Extraction from Biological Sequences
Description
Usage
Arguments
Value
Examples
Description
This function reads a directory that contains the output files of SPINE-X.
It gets the directory path as the input and returns a list of vectors. Each vector includes the ASA predicted value for amino acids of the sequence.
Usage
1
readASAdir(dirPath)
Arguments
dirPath
path of the directory which contains all the output files of SPINE-X. Each file belongs to a sequence.
Value
a list of vectors with all the predicted ASA value for each amino acid. The length of the
list is the number of files(sequences) and the length of each vector is (length of sequence(i))
Examples
1
2
3
PredASAdir<-system.file("testForder",package="ftrCOOL")
PredASAdir<-paste0(PredASAdir,"/ASAdir/")
PredVectASA<-readASAdir(PredASAdir)
ftrCOOL documentation built on Nov. 30, 2021, 1:07 a.m.
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Description Usage Arguments Value Examples
Description
This function reads a directory that contains the output files of SPINE-X. It gets the directory path as the input and returns a list of vectors. Each vector includes the ASA predicted value for amino acids of the sequence.
Usage
1 | readASAdir(dirPath)
|
Arguments
dirPath |
path of the directory which contains all the output files of SPINE-X. Each file belongs to a sequence. |
Value
a list of vectors with all the predicted ASA value for each amino acid. The length of the list is the number of files(sequences) and the length of each vector is (length of sequence(i))
Examples
1 2 3 | PredASAdir<-system.file("testForder",package="ftrCOOL")
PredASAdir<-paste0(PredASAdir,"/ASAdir/")
PredVectASA<-readASAdir(PredASAdir)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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