ftrCOOL
Feature Extraction from Biological Sequences

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Functions
398
Source code
253
Man pages
166
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ftrCOOL: Feature Extraction from Biological Sequences
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API

API for ftrCOOL
Feature Extraction from Biological Sequences

Global functions
AA2Binary Man page Source code
AAKpartComposition Man page Source code
AAindex Man page Source code
AAutoCor Man page Source code
ACC_CorAA Source code
ACC_CorDi Source code
ACC_CorDi_RNA Source code
ACC_CorTri Source code
AC_CorAA Source code
AC_CorDi Source code
AC_CorDi_RNA Source code
AC_CorTri Source code
AESNN3 Man page Source code
ANF_DNA Man page Source code
ANF_RNA Man page Source code
APAAC Man page Source code
APkNUCTri_DNA Man page Source code
APkNUCdi_DNA Man page Source code
APkNUCdi_RNA Man page Source code
ASA Man page Source code
ASDC Man page Source code
ASDC_DNA Man page Source code
ASDC_RNA Man page Source code
AutoCorDiNUC_DNA Man page Source code
AutoCorDiNUC_RNA Man page Source code
AutoCorTriNUC_DNA Man page Source code
BLOSUM62 Man page Source code
CC_CorAA Source code
CC_CorDi Source code
CC_CorDi_RNA Source code
CC_CorTri Source code
CTD Man page Source code
CTDC Man page Source code
CTDD Man page Source code
CTDT Man page Source code
CkSAApair Man page Source code
CkSGAApair Man page Source code
CkSNUCpair_DNA Man page Source code
CkSNUCpair_RNA Man page Source code
CodonFraction Man page Source code
CodonUsage_DNA Man page Source code
CodonUsage_RNA Man page Source code
DDE Man page Source code
DPCP_DNA Man page Source code
DPCP_RNA Man page Source code
Dc Source code
DcGrp Source code
DiNUC2Binary_DNA Man page Source code
DiNUC2Binary_RNA Man page Source code
DiNUCindex_DNA Man page Source code
DiNUCindex_RNA Man page Source code
DisorderB Man page Source code
DisorderC Man page Source code
DisorderS Man page Source code
DistancePair Man page Source code
EAAComposition Man page Source code
EGAAComposition Man page Source code
EIIP Man page Source code
ENUComposition_DNA Man page Source code
ENUComposition_RNA Man page Source code
EffectiveNumberCodon Man page Source code
ExpectedValKmerNUC_DNA Man page Source code
ExpectedValKmerNUC_RNA Man page Source code
ExpectedValueAA Man page Source code
ExpectedValueGAA Man page Source code
ExpectedValueGKmerAA Man page Source code
ExpectedValueKmerAA Man page Source code
GAAKpartComposition Man page Source code
G_Ccontent_DNA Man page Source code
G_Ccontent_RNA Man page Source code
Geary_CorDi_RNA Source code
Geary_CorTri Source code
Geary_corAA Source code
Geary_corDi Source code
GrpDDE Man page Source code
KNNPeptide Man page Source code
KNNProtein Man page Source code
KNN_DNA Man page Source code
KNN_RNA Man page Source code
LocalPoSpKAAF Man page Source code
LocalPoSpKNUCF_DNA Man page Source code
LocalPoSpKNUCF_RNA Man page Source code
MMI_DNA Man page Source code
MMI_RNA Man page Source code
Mismatch_DNA Man page Source code
Mismatch_RNA Man page Source code
Moran_CorDi_RNA Source code
Moran_CorTri Source code
Moran_corAA Source code
Moran_corDi Source code
NCP_DNA Man page Source code
NCP_RNA Man page Source code
NUC2Binary_DNA Man page Source code
NUC2Binary_RNA Man page Source code
NUCKpartComposition_DNA Man page Source code
NUCKpartComposition_RNA Man page Source code
NormalizeMBorto_CorDi_RNA Source code
NormalizeMBorto_CorTri Source code
NormalizeMBorto_corAA Source code
NormalizeMBorto_corDi Source code
OPF_10bit Man page Source code
OPF_7bit_T1 Man page Source code
OPF_7bit_T2 Man page Source code
OPF_7bit_T3 Man page Source code
PCPseDNC Man page Source code
PS2_DNA Man page Source code
PS2_RNA Man page Source code
PS3_DNA Man page Source code
PS3_RNA Man page Source code
PS4_DNA Man page Source code
PS4_RNA Man page Source code
PSEAAC Man page Source code
PSEkNUCTri_DNA Man page Source code
PSEkNUCdi_DNA Man page Source code
PSEkNUCdi_RNA Man page Source code
PSSM Man page Source code
PSTNPds Man page Source code
PSTNPss_DNA Man page Source code
PSTNPss_RNA Man page Source code
PseEIIP Man page Source code
PseKRAAC_T1 Man page Source code
PseKRAAC_T10 Man page Source code
PseKRAAC_T11 Man page Source code
PseKRAAC_T12 Man page Source code
PseKRAAC_T13 Man page Source code
PseKRAAC_T14 Man page Source code
PseKRAAC_T15 Man page Source code
PseKRAAC_T16 Man page Source code
PseKRAAC_T2 Man page Source code
PseKRAAC_T3A Man page Source code
PseKRAAC_T3B Man page Source code
PseKRAAC_T4 Man page Source code
PseKRAAC_T5 Man page Source code
PseKRAAC_T6A Man page Source code
PseKRAAC_T6B Man page Source code
PseKRAAC_T7 Man page Source code
PseKRAAC_T8 Man page Source code
PseKRAAC_T9 Man page Source code
QSOrder Man page Source code
SAAC Man page Source code
SGAAC Man page Source code
SOCNumber Man page Source code
SSEB Man page Source code
SSEC Man page Source code
SSES Man page Source code
TPCP_DNA Man page Source code
Tm Source code
TmGrp Source code
TorsionAngle Man page Source code
TriNUCindex_DNA Man page Source code
Tv Source code
TvGrp Source code
Zcurve12bit_DNA Man page Source code
Zcurve12bit_RNA Man page Source code
Zcurve144bit_DNA Man page Source code
Zcurve144bit_RNA Man page Source code
Zcurve36bit_DNA Man page Source code
Zcurve36bit_RNA Man page Source code
Zcurve48bit_DNA Man page Source code
Zcurve48bit_RNA Man page Source code
Zcurve9bit_DNA Man page Source code
Zcurve9bit_RNA Man page Source code
alphabetCheck Man page Source code
binary_3bit_T1 Man page Source code
binary_3bit_T2 Man page Source code
binary_3bit_T3 Man page Source code
binary_3bit_T4 Man page Source code
binary_3bit_T5 Man page Source code
binary_3bit_T6 Man page Source code
binary_3bit_T7 Man page Source code
binary_5bit_T1 Man page Source code
binary_5bit_T2 Man page Source code
binary_6bit Man page Source code
codonAdaptionIndex Man page Source code
conjointTriad Man page Source code
conjointTriadKS Man page Source code
fa.read Man page
fickettScore Man page Source code
findORF Source code
findORF_RNA Source code
gap_model Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
kAAComposition Man page Source code
kGAAComposition Man page Source code
kNUComposition_DNA Man page Source code
kNUComposition_RNA Man page Source code
lambda_model Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
maxORF Man page Source code
maxORF_RNA Man page Source code
maxORFlength_DNA Man page Source code
maxORFlength_RNA Man page Source code
nameKmer Man page Source code
needleman Man page Source code
nonStandardSeq Man page
readASAdir Man page Source code
readDisDir Man page Source code
readPSSMdir Man page Source code
readTorsionDir Man page Source code
readss2Dir Man page Source code
revComp Man page Source code
zSCALE Man page Source code
ftrCOOL documentation built on Nov. 30, 2021, 1:07 a.m.

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