CedarCreek.2004.2006.boot.performances: Evaluate by bootstrapping the robustness of species...

In functClust: Functional Clustering of Redundant Components of a System

Description

Performances are randomly removed from the dataset, from 1 to n-1 performances (with n = total number of performances), a functional clustering of species is built, and the effect of this performance remove on species clustering is evaluated by comparing the resulting species clustering with the species clustering obtained with all systemic performances. The perturbation is measured by using different clustering indices.

Here, the total number of performances is 3 only, then the interest of this process is very limited.

Usage

CedarCreek.2004.2006.boot.performances

Format

A list of matrices, each matrix containing the results for a given clustering index. The indices are "Czekanowski_Dice", "Folkes_Mallows", "Jaccard", "Kulczynski", "Precision", "Rand", "Recall", "Rogers_Tanimoto", "Russel_Rao", "Sokal_Sneath1" and "Sokal_Sneath2" index.

Details

None.

functClust documentation built on Dec. 2, 2020, 5:06 p.m.