Graph Based Multiple Comparison Procedures

bdiagNA | Create a Block Diagonal Matrix with NA outside the diagonal |

bonferroni.test | Weighted Bonferroni-test |

bonferroni.trimmed.simes.test | Trimmed Simes test for intersections of two hypotheses and... |

calcPower | Calculate power values |

confint | Simultaneous confidence intervals for sequentially rejective... |

corMatWizard | Graphical User Interface for the creation of correlation... |

doInterim | EXPERIMENTAL: Evaluate conditional errors at interim for a... |

entangled | Class entangledMCP |

exampleGraphs | Functions that create different example graphs |

extractPower | Calculate power values |

generateBounds | generateBounds |

generatePvals | generatePvals |

generateTest | generateTest |

generateWeights | generateWeights |

getJavaInfo | Get Memory and Runtime Info from JVM |

gMCP | Graph based Multiple Comparison Procedures |

gMCP.extended | Graph based Multiple Comparison Procedures |

gMCP-package | Graphical described Multiple Comparison Procedures |

gMCPReport | Automatic Generation of gMCP Reports |

gMCPResult | Class gMCPResult |

gPADInterim | Class gPADInterim |

graph2latex | Graph2LaTeX |

graphAnalysis | Analysis of a gMCP-Graph |

graphGUI | Graphical User Interface for graphical described multiple... |

graphMCP | Class graphMCP |

graphTest | Multiple testing using graphs |

hydroquinone | Hydroquinone Mutagenicity Assay |

joinGraphs | Joins two graphMCP objects |

matrix2graph | Matrix2Graph and Graph2Matrix |

parametric.test | Weighted parametric test |

placeNodes | Placement of graph nodes |

plotSimCI | Plot confidence intervals |

rejectNode | Rejects a node/hypothesis and updates the graph accordingly. |

replaceVariables | Replaces variables in a general graph with specified numeric... |

rqmvnorm | Random sample from the multivariate normal distribution |

sampSize | Sample size calculations |

sampSizeCore | Function for sample size calculation |

secondStageTest | EXPERIMENTAL: Construct a valid level alpha test for the... |

simes.on.subsets.test | Simes on subsets, otherwise Bonferroni |

simes.test | Weighted Simes test |

simvastatin | Simvastatin and Colesevelam Treatment in Patients with... |

subgraph | Get a subgraph |

substituteEps | Substitute Epsilon |

unitTestsGMCP | Run the R unit (and optional the JUnit) test suite for gMCP |

weighted.test.functions | Weighted Test Functions for use with gMCP |

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