PCR_coef_path: Plotting the fitted path of a PCR model.

In gamlss.ggplots: Plotting Generalised Additive Model for Location, Scale and Shape

Plotting the fitted path of a PCR model.

Description

This function is similar to the function plot.PCR() which is used to plot the path of a fitted principal componet regression model, fitted using the function fitPCR() of the package gamlss.foreach.

Usage

pcr_coef_path(x, legend=FALSE, plot=TRUE)

pcr_path(x, parameter = c("mu", "sigma", "nu", "tau"),
          legend = FALSE, plot = TRUE)

Arguments

x	a fitted PCR object (or a fitted GAMLSS object for function pcr_path(
legend	whether legent is needed
plot	whether to plot the path
parameter	which GAMLSS parameter, between "mu", "sigma", "nu", "tau"

Value

A gg-plot.

Author(s)

Mikis Stasinopoulos, Bob Rigby and Fernanda De Bastiani

References

Rigby, R. A. and Stasinopoulos D. M. (2005). Generalized additive models for location, scale and shape,(with discussion), Appl. Statist., 54, part 3, pp 507-554.

Rigby, R. A., Stasinopoulos, D. M., Heller, G. Z., and De Bastiani, F. (2019) Distributions for modeling location, scale, and shape: Using GAMLSS in R, Chapman and Hall/CRC. An older version can be found in https://www.gamlss.com/.

Stasinopoulos D. M. Rigby R.A. (2007) Generalized additive models for location scale and shape (GAMLSS) in R. Journal of Statistical Software, Vol. 23, Issue 7, Dec 2007, https://www.jstatsoft.org/v23/i07/.

Stasinopoulos D. M., Rigby R.A., Heller G., Voudouris V., and De Bastiani F., (2017) Flexible Regression and Smoothing: Using GAMLSS in R, Chapman and Hall/CRC.

(see also https://www.gamlss.com/).

See Also

plot.PCR

Examples

library(gamlss.foreach)
library(glmnet)
data(QuickStartExample)
attach(QuickStartExample)
hist(y, main="(a)")
if (is.null(rownames(x))) 
  colnames(x) <- paste0("X", seq(1:dim(x)[2]))
# fitting
MM<- fitPCR(x,y, k=log(100))
pp<-pcr_coef_path(MM)
pp+ geom_vline(xintercept = MM$pc, colour = "gray") 
# using gamlss
m1 <- gamlss(y~pcr(x=x))
pcr_path(m1)

gamlss.ggplots documentation built on Sept. 3, 2023, 5:08 p.m.