chr_pos_a1_a2: SNP id by chr:pos+a1/a2
In gap: Genetic Analysis Package
chr_pos_a1_a2 R Documentation
SNP id by chr:pos+a1/a2
Description
SNP id by chr:pos+a1/a2
Usage
chr_pos_a1_a2(
chr,
pos,
a1,
a2,
prefix = "chr",
seps = c(":", "_", "_"),
uppercase = TRUE
)
Arguments
chr
Chromosome.
pos
Position.
a1
Allele 1.
a2
Allele 2.
prefix
Prefix of the identifier.
seps
Delimiters.
uppercase
A flag to return in upper case.
Details
This function generates unique identifiers for variants
Value
Identifier.
Examples
# rs12075
chr_pos_a1_a2(1,159175354,"A","G",prefix="chr",seps=c(":","_","_"),uppercase=TRUE)
gap documentation built on Aug. 26, 2023, 5:07 p.m.
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| chr_pos_a1_a2 | R Documentation |
SNP id by chr:pos+a1/a2
Description
SNP id by chr:pos+a1/a2
Usage
chr_pos_a1_a2(
chr,
pos,
a1,
a2,
prefix = "chr",
seps = c(":", "_", "_"),
uppercase = TRUE
)
Arguments
chr |
Chromosome. |
pos |
Position. |
a1 |
Allele 1. |
a2 |
Allele 2. |
prefix |
Prefix of the identifier. |
seps |
Delimiters. |
uppercase |
A flag to return in upper case. |
Details
This function generates unique identifiers for variants
Value
Identifier.
Examples
# rs12075
chr_pos_a1_a2(1,159175354,"A","G",prefix="chr",seps=c(":","_","_"),uppercase=TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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