circos.cis.vs.trans.plot: circos plot of cis/trans classification

In gap: Genetic Analysis Package

circos plot of cis/trans classification

Description

circos plot of cis/trans classification

Usage

circos.cis.vs.trans.plot(hits, panel, id, radius = 1e+06)

Arguments

hits	A text file as input data with varibles named "CHR","BP","SNP","prot".
panel	Protein panel with prot(ein), uniprot (id) and "chr","start","end","gene".
id	Identifier.
radius	The flanking distance as cis.

Details

The function implements a circos plot at the early stage of SCALLOP-INF meta-analysis.

Value

None.

Examples

## Not run: 
  circos.cis.vs.trans.plot(hits="INF1.merge", panel=inf1, id="uniprot")

## End(Not run)

gap documentation built on Aug. 26, 2023, 5:07 p.m.