Files in genMOSSplus

Application of MOSS algorithm to genome-wide association study (GWAS)

MD5

DESCRIPTION

NAMESPACE

inst/doc/genMOSSplus-manual.pdf

inst/exdata/mach20CONTROL.mlinfo.tar.bz2

inst/exdata/indices.ann.txt.tar.bz2

inst/exdata/chr20.annotation.txt.tar.bz2

inst/exdata/mach20CASE.mlgeno.tar.bz2

inst/exdata/chr20.hap.gz.tar.bz2

inst/exdata/genotypes_10_90.txt.tar.bz2

inst/exdata/Identifiers_comma.csv.tar.bz2

inst/exdata/conf.txt.tar.bz2

inst/exdata/mach20CONTROL.mlgeno.tar.bz2

inst/exdata/mach20CASE.mlinfo.tar.bz2

inst/exdata/chr20.snps.tar.bz2

demo/gendemo.R

demo/00Index

R/run1.moss.R R/cvFunc.R R/pre7.add.conf.var.unix.R R/findIndex.R R/pre4.combine.case.control.batch.R R/findNeighbours.R R/pre7.add.conf.var.R R/pre5.genos2numeric.R R/pre1.plink2mach.R R/extract.genos.R R/pre1.plink2mach.batch.R R/get.position.R R/subdir.create.R R/decToBin.R R/findFormula.R R/diff.square.sum.R R/prettyHierFormula.R R/genos.clean.R R/pre2.remove.genos.batch.R R/pre0.dir.create.R R/MOSS.GWAS.main.R R/findLogMargLik.R R/binToDec.R R/get.chrom.num.R R/get.hap.unzip.R R/repRow.R R/ex2plink.R R/pre8.split.train.test.R R/MOSS.Hierarchical.R R/pre5.genos2numeric.batch.R R/findGenerators.R R/findHierNeighbours.R R/checkArgsMOSS.GWAS.R R/call.mach.nohap.step1.R R/findModel.R R/fitInteractionModels.R R/makeModelHierarchical.R R/machout2machin.R R/get.hap.zip.R R/pre6.merge.genos.R R/genos2numeric.batch.R R/clean.rsq.combine.R R/machout2id.R R/len.empty.vec.R R/logLaplace.R R/pre3.call.mach.R R/get.file.name.R R/pre4.combine.case.control.R R/pre3.call.mach.batch.R R/pre8.split.train.test.batch.R R/genos2numeric.R R/prettyFormula.R R/rand.ints.R R/findDualGenerators.R R/call.mach.nohap.R R/call.mach.nohap.step2.R R/get.file.copy.R R/MOSS.GWAS.R R/get.data.dims.R R/call.mach.R R/getSubsets.R R/randomHierModel.R R/tune1.subsets.R R/get.ext.R R/pre2.remove.genos.R R/genos.clean.batch.R

src/c_code.c

man/get.data.dims.Rd man/ex2plink.Rd man/get.file.copy.Rd man/pre5.genos2numeric.batch.Rd man/pre5.genos2numeric.Rd man/pre7.add.conf.var.unix.Rd man/pre0.dir.create.Rd man/pre3.call.mach.Rd man/pre4.combine.case.control.Rd man/pre8.split.train.test.batch.Rd man/pre1.plink2mach.Rd man/pre6.merge.genos.Rd man/tune1.subsets.Rd man/pre2.remove.genos.Rd man/genos.clean.Rd man/run1.moss.Rd man/pre7.add.conf.var.Rd man/pre2.remove.genos.batch.Rd man/pre3.call.mach.batch.Rd man/pre4.combine.case.control.batch.Rd man/MOSS.GWAS.Rd man/pre8.split.train.test.Rd man/pre1.plink2mach.batch.Rd man/genos.clean.batch.Rd man/genMOSSplus-package.Rd

genMOSSplus documentation built on May 1, 2019, 10:31 p.m.