| AUC | Calculates the AUC of an ROC curve. |
| avgrocs | Takes the vertical average of ROC curves. |
| beautify_rule | Replaces consecutive "&"s and "|"s in a string to a single &... |
| binarySearch_bin | Finds the index of the bin a number belongs to using binary... |
| calc_crit | Calculates penalized or unpenalized loss in K and eta given... |
| check_endpoints | Checks if two equally sized numeric vectors satisfy the... |
| compare_two_results | Compares two lists returned from estimate(). |
| compare_two_sub_results | Compares two lists returned from get_results(). |
| cov_cons | Random generator of inverse covariance matrices. |
| crbound_mu | The Cram\'er-Rao lower bound (times 'n') for estimating the... |
| crbound_sigma | The Cram\'er-Rao lower bound (times 'n') for estimating the... |
| diff_lists | Computes the sum of absolute differences between two lists. |
| diff_vecs | Computes the sum of absolute differences in the finite... |
| domain_for_C | Returns a list to be passed to C that represents the domain. |
| eBIC | eBIC score with or without refitting. |
| estimate | The main function for the generalized score-matching... |
| find_max_ind | Finds the max index in a vector that does not exceed a target... |
| frac_pow | Evaluate x^(a/b) and |x|^(a/b) with integer a and b with... |
| gcd | Finds the greatest (positive) common divisor of two integers. |
| gen | Random data generator from general 'a'-'b' distributions with... |
| get_crit_nopenalty | Minimized loss for unpenalized restricted asymmetric models. |
| get_dist | Finds the distance of each element in a matrix x to the its... |
| get_elts | The function wrapper to get the elements necessary for... |
| get_elts_ab | The R implementation to get the elements necessary for... |
| get_elts_exp | The R implementation to get the elements necessary for... |
| get_elts_gamma | The R implementation to get the elements necessary for... |
| get_elts_gauss | The R implementation to get the elements necessary for... |
| get_elts_loglog | The R implementation to get the elements necessary for... |
| get_elts_loglog_simplex | The R implementation to get the elements necessary for... |
| get_elts_trun_gauss | The R implementation to get the elements necessary for... |
| get_g0 | Calculates the l2 distance to the boundary of the domain and... |
| get_g0_ada | Adaptively truncates the l2 distance to the boundary of the... |
| get_h_hp | Generator of h and hp (derivative of h) functions. |
| get_h_hp_adaptive | Generator of adaptive h and hp (derivative of h) functions. |
| get_h_hp_vector | Generator of h and hp (derivative of h) functions. |
| get_postfix_rule | Changes a logical expression in infix notation to postfix... |
| get_results | Estimate K and eta using elts from 'get_elts()' given one... |
| get_safe_log_h_hp | Asymptotic log of 'h' and 'hp' functions for large 'x' for... |
| get_trun | The truncation point for 'h' for 'h' that is truncated... |
| h_of_dist | Finds the distance of each element in a matrix x to the its... |
| in_bound | Returns whether a vector or each row of a matrix falls inside... |
| interval_intersection | Finds the intersection between two unions of intervals. |
| interval_union | Finds the union between two unions of intervals. |
| lambda_max | Analytic solution for the minimum lambda_K that gives the... |
| makecoprime | Makes two integers coprime. |
| make_domain | Creates a list of elements that defines the domain for a... |
| make_folds | Helper function for making fold IDs for cross validation. |
| mu_sigmasqhat | Estimates the mu and sigma squared parameters from a... |
| naiveSearch_bin | Finds the index of the bin a number belongs to using naive... |
| parse_ab | Parses an ab setting into rational numbers a and b. |
| parse_ineq | Parses an ineq expression into a list of elements that... |
| random_init_polynomial | Randomly generate an initial point in the domain defined by a... |
| random_init_simplex | Generates a random point in the (p-1)-simplex. |
| random_init_uniform | Generates random numbers from a finite union of intervals. |
| ran_mat | Random generator of matrices with given eigenvalues. |
| read_exponent | Parses the exponent part into power_numer and power_denom. |
| read_exponential | Parses the integer coefficient in an exponential term. |
| read_one_term | Parses the first term of a non-uniform expression. |
| read_uniform_term | Attempts to parse a single term in x into power_numer and... |
| refit | Loss for a refitted (restricted) unpenalized model |
| rexp_truncated | Generates translated and truncated exponential variables. |
| rlaplace_truncated | Generates laplace variables truncated to a finite union of... |
| rlaplace_truncated_centered | Generates centered laplace variables with scale 1. |
| s_at | Returns the character at a position of a string. |
| search_bin | Finds the index of the bin a number belongs to. |
| s_output | Helper function for outputting if verbose. |
| test_lambda_bounds | Searches for a tight bound for lambda_K that gives the empty... |
| test_lambda_bounds2 | Searches for a tight bound for lambda_K that gives the empty... |
| tp_fp | Calculates the true and false positive rates given the... |
| update_finite_infinity_for_uniform | Maximum between finite_infinity and 10 times the max abs... |
| varhat | Asymptotic variance (times 'n') of the estimator for 'mu' or... |
