Functions to fit geostatistical data. The data can be continuous, binary or count data and the models implemented are flexible. Conjugate priors are assumed on some parameters while inference on the other parameters can be done through a full Bayesian analysis of by empirical Bayes methods.

Author | Evangelos Evangelou <e.evangelou@maths.bath.ac.uk>, Vivekananda Roy <vroy@iastate.edu> |

Date of publication | 2015-11-16 08:27:36 |

Maintainer | Evangelos Evangelou <e.evangelou@maths.bath.ac.uk> |

License | GPL (>= 2) |

Version | 0.3.3 |

**bf1skel:** Computation of Bayes factors at the skeleton points

**bf2new:** Compute the Bayes factors at new points

**bf2optim:** Empirical Bayes estimator

**bfse:** Computation of standard errors for Bayes factors

**comparebinlinks:** Compare two link functions for the binomial distribution

**ebsglmm:** Empirical Bayes estimation for SGLMM

**ebstrga:** Empirical Bayes estimation for the TGRFM

**geoBayes:** The 'geoBayes' package

**linkfcn:** Calculate the link function for exponential families

**mcmcmake:** Convert to an 'mcmc' object

**mcsglmm:** MCMC samples from the Spatial GLMM

**mcstrga:** MCMC samples from the transformed Gaussian model

**mkpredgrid2d:** Make prediction grid

**plotbf2:** Plot the estimated Bayes factors

**rhizoctonia:** Rhizoctonia root rot infections

**stackdata:** Combine 'data.frame's

geoBayes

geoBayes/src

geoBayes/src/Makevars

geoBayes/src/msg.c

geoBayes/src/flogsumexp.f90

geoBayes/src/bmargin.f90

geoBayes/src/auxfcns.c

geoBayes/src/msgmc.f90

geoBayes/src/llik.f90

geoBayes/src/lbfgsbmod.f90

geoBayes/src/linkfcn.f90

geoBayes/src/pdfy.f90

geoBayes/src/interfaces.f90

geoBayes/src/bfsp.f90

geoBayes/src/calcb2.f90

geoBayes/src/pdfw.f90

geoBayes/src/mcspz0.f90

geoBayes/src/mcsp2.f90

geoBayes/src/covfun.f90

geoBayes/src/betaprior.f90

geoBayes/NAMESPACE

geoBayes/demo

geoBayes/demo/rhizoctonia2.R

geoBayes/demo/rhizoctonia1.R

geoBayes/demo/yield3.R

geoBayes/demo/rhizoctonia5.R

geoBayes/demo/rhizoctonia3.R

geoBayes/demo/00Index

geoBayes/demo/yield4.R

geoBayes/demo/yield2.R

geoBayes/NEWS

geoBayes/data

geoBayes/data/rhizoctonia.rda

geoBayes/R

geoBayes/R/geoesteb.R
geoBayes/R/linkfcn.R
geoBayes/R/mcsp2.R
geoBayes/R/bfse.R
geoBayes/R/rhizoctonia-data.R
geoBayes/R/calcbf.R
geoBayes/R/comparebinlinks.R
geoBayes/R/bf.R
geoBayes/R/geobayes-package.R
geoBayes/R/util.R
geoBayes/MD5

geoBayes/DESCRIPTION

geoBayes/man

geoBayes/man/ebsglmm.Rd
geoBayes/man/bf2new.Rd
geoBayes/man/mcsglmm.Rd
geoBayes/man/comparebinlinks.Rd
geoBayes/man/mcstrga.Rd
geoBayes/man/stackdata.Rd
geoBayes/man/bf2optim.Rd
geoBayes/man/ebstrga.Rd
geoBayes/man/linkfcn.Rd
geoBayes/man/mcmcmake.Rd
geoBayes/man/plotbf2.Rd
geoBayes/man/bf1skel.Rd
geoBayes/man/mkpredgrid2d.Rd
geoBayes/man/geoBayes.Rd
geoBayes/man/rhizoctonia.Rd
geoBayes/man/bfse.Rd
geoBayes/.Rinstignore

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