R/sanitize_type_arg.R

In ggeffects: Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs

.sanitize_type_argument <- function(model, type = NULL, verbose = TRUE) {
  # do nothing here...
  if (is.null(type) || is.null(model)) {
    return(NULL)
  }

  # do nothing for unrecognized model classes
  model_class <- class(model)[1]
  if (!model_class %in% .typedic$class) {
    return(type)
  }

  # if "type" is no valid type, return most common valid type
  valid_types <- .typedic$type[.typedic$class == model_class]
  if (!type %in% valid_types) {
    if (verbose) {
      insight::format_alert(
        paste0(
          "\"", type, "\" is no valid option for the `scale` argument.",
          " Changing to the supported \"", valid_types[1], "\"-type now."
        )
      )
    }
    return(valid_types[1])
  }

  # we have a valid type here
  return(type)
}


# all valid "type" arguments for each model class
.typedic <- data.frame(
  class = c(
    "bam", "bam", "bart", "bart", "betareg", "betareg", "betareg",
    "betareg", "betareg", "bife", "bife", "bracl", "brglmFit", "brglmFit",
    "brmsfit", "brmsfit", "brmsfit", "brmsfit", "brmultinom", "brmultinom",
    "clm", "clm", "clm", "clogit", "clogit", "clogit", "clogit",
    "coxph", "coxph", "coxph", "coxph", "coxph_weightit", "coxph_weightit",
    "coxph_weightit", "coxph_weightit", "crch", "crch", "crch", "crch",
    "hetprob", "hetprob", "hxlr", "hxlr", "hxlr", "hxlr", "ivpml",
    "ivpml", "flexsurvreg", "flexsurvreg", "flexsurvreg", "flexsurvreg",
    "flexsurvreg", "flexsurvreg", "flexsurvreg", "flexsurvreg", "flexsurvreg",
    "fixest", "fixest", "fixest", "hurdle", "hurdle", "hurdle", "hurdle",
    "iv_robust", "lm", "gam", "gam", "Gam", "Gam", "Gam", "geeglm",
    "geeglm", "Gls", "glimML", "glimML", "glm", "glm", "glm", "glmerMod",
    "glmerMod", "glmgee", "glmrob", "glmrob", "glmmTMB", "glmmTMB",
    "glmmTMB", "glmmTMB", "glmmTMB", "glmmTMB", "glmmPQL", "glmmPQL",
    "glmx", "glm_weightit", "glm_weightit", "glm_weightit", "glm_weightit",
    "glm_weightit", "ivreg", "lmerMod", "lmerModLmerTest", "lmrob",
    "lm_robust", "lrm", "lrm", "lrm", "mblogit", "mblogit", "mblogit",
    "mclogit", "mclogit", "mclogit", "MCMCglmm", "model_fit", "model_fit",
    "model_fit", "workflow", "workflow", "workflow", "multinom",
    "multinom", "multinom_weightit", "multinom_weightit", "multinom_weightit",
    "mhurdle", "mhurdle", "mhurdle", "mlogit", "mvgam", "mvgam",
    "mvgam", "mvgam", "mvgam", "negbin", "negbin", "negbin", "ols",
    "oohbchoice", "oohbchoice", "orm", "orm", "orm", "ordinal_weightit",
    "ordinal_weightit", "ordinal_weightit", "ordinal_weightit", "ordinal_weightit",
    "polr", "rendo.base", "rendo.base", "rlm", "selection", "selection",
    "selection", "speedlm", "speedglm", "speedglm", "stanreg", "stanreg",
    "survreg", "survreg", "survreg", "svyglm", "svyglm", "svyolr",
    "tobit", "tobit1", "tobit1", "tobit1", "zeroinfl", "zeroinfl",
    "zeroinfl", "zeroinfl"
  ),
  type = c(
    "response", "link", "ev", "ppd", "response", "link", "precision",
    "quantile", "variance", "response", "link", "probs", "response",
    "link", "response", "link", "prediction", "average", "probs",
    "class", "prob", "cum.prob", "linear.predictor", "expected",
    "lp", "risk", "survival", "expected", "lp", "risk", "survival",
    "expected", "lp", "risk", "survival", "response", "location",
    "scale", "density", "pr", "xb", "location", "cumprob", "scale",
    "density", "pr", "xb", "response", "mean", "link", "lp", "linear",
    "rmst", "survival", "hazard", "cumhaz", "invlink(link)", "response",
    "link", "response", "prob", "count", "zero", "response", "response",
    "response", "link", "invlink(link)", "response", "link", "response",
    "link", "lp", "response", "link", "invlink(link)", "response",
    "link", "response", "link", "response", "response", "link", "response",
    "link", "conditional", "zprob", "zlink", "disp", "response",
    "link", "response", "invlink(link)", "probs", "response", "lp",
    "link", "response", "response", "response", "response", "response",
    "fitted", "lp", "mean", "response", "latent", "link", "response",
    "latent", "link", "response", "numeric", "prob", "class", "numeric",
    "prob", "class", "probs", "latent", "probs", "response", "mean",
    "E", "Ep", "p", "response", "response", "link", "expected", "detection",
    "latent_N", "invlink(link)", "response", "link", "lp", "probability",
    "utility", "fitted", "mean", "lp", "probs", "response", "link",
    "lp", "mean", "probs", "response", "link", "response", "response",
    "link", "unconditional", "response", "response", "link", "response",
    "link", "response", "link", "quantile", "response", "link", "probs",
    "response", "expvalue", "linpred", "prob", "response", "prob",
    "count", "zero"
  ),
  stringsAsFactors = FALSE
)


# the default "type" arguments for each model class. Used to set the
# default type in "ggaverage()"
.default_type <- data.frame(
  class = c(
    "other", "bam", "bart", "betareg", "bife",
    "bracl", "brglmFit", "brmsfit", "brmultinom", "clm", "clogit",
    "coxph", "crch", "hetprob", "hxlr", "ivpml", "fixest", "hurdle",
    "iv_robust", "lm", "gam", "Gam", "geeglm", "Gls", "glimML", "glm",
    "glmerMod", "glmrob", "glmmTMB", "glmmPQL", "glmx", "ivreg",
    "lmerMod", "lmerModLmerTest", "lmrob", "lm_robust", "lrm", "mblogit",
    "mclogit", "MCMCglmm", "model_fit", "workflow", "multinom", "mhurdle",
    "mlogit", "mvgam", "negbin", "ols", "oohbchoice", "orm", "polr",
    "rlm", "selection", "speedlm", "speedglm", "stanreg", "survreg",
    "svyglm", "svyolr", "tobit", "tobit1", "zeroinfl"
  ),
  type = c(
    "response",
    "response", "ev", "response", "response", "probs", "response",
    "response", "probs", "prob", "expected", "expected", "response",
    "pr", "location", "pr", "invlink(link)", "response", "response",
    "response", "response", "invlink(link)", "response", "lp", "response",
    "invlink(link)", "response", "response", "response", "response",
    "response", "response", "response", "response", "response", "response",
    "fitted", "response", "response", "response", "numeric", "numeric",
    "probs", "E", "response", "response", "invlink(link)", "lp",
    "probability", "fitted", "probs", "response", "response", "response",
    "response", "response", "response", "response", "probs", "response",
    "expvalue", "response"
  ),
  stringsAsFactors = FALSE
)