Nothing
# Main function -----------------------------------------------------------
#' Add a list of scales for non-standard aesthetics
#'
#' Distributes a list of non-standard aesthetics scales to the plot,
#' substituting geom and scale settings as necessary to display the non-standard
#' aesthetics. Useful for mapping different geoms to different scales for
#' example.
#'
#' @param scalelist A `list` wherein elements are the results of calls to a
#' scale function with a non-standard aesthetic set as the `aesthetic`
#' argument.
#' @param replaces A `character` vector of the same length as- and parallel
#' to- `scalelist`, indicating what standard aesthetic to replace with
#' the non-standard aesthetic. Typically `"colour"` or `"fill"`.
#'
#' @description This function should only be called after all layers that the
#' non-standard aesthetic scales affects have been added to the plot.
#'
#' Inside a layer, the non-standard aesthetic should be part of the call to
#' `aes` mapping.
#'
#' May return a warning that the plot is ignoring unknown aesthetics.
#'
#' @return A `list` of which the elements are of the class
#' `MultiScale`.
#' @export
#'
#' @examples
#' # Annotation of heatmap
#' iriscor <- cor(t(iris[, 1:4]))
#'
#' df <- data.frame(
#' x = as.vector(row(iriscor)),
#' y = as.vector(col(iriscor)),
#' value = as.vector(iriscor)
#' )
#'
#' annotation <- data.frame(
#' z = seq_len(nrow(iris)),
#' Species = iris$Species,
#' Leaves = ifelse(iris$Species == "setosa", "Short", "Long")
#' )
#'
#' ggplot(df, aes(x, y)) +
#' geom_raster(aes(fill = value)) +
#' geom_tile(data = annotation,
#' aes(x = z, y = -5, spec = Species), height = 5) +
#' geom_tile(data = annotation,
#' aes(y = z, x = -5, leav = Leaves), width = 5) +
#' scale_listed(
#' list(scale_fill_brewer(palette = "Set1", aesthetics = "spec"),
#' scale_fill_brewer(palette = "Dark2", aesthetics = "leav")),
#' replaces = c("fill", "fill")
#' )
scale_listed <- function(scalelist, replaces = NULL) {
# Check replaces validity
if (length(scalelist) != length(replaces)) {
cli::cli_abort(
"The {.arg replaces} argument must be parallel to and of the same \\
length as the {.arg scalelist} argument."
)
}
replaces <- standardise_aes_names(replaces)
if (!(all(replaces %in% .all_aesthetics))) {
cli::cli_abort(
"The aesthetics in the {.arg replaces} argument must be valid aesthetics."
)
}
# Check scalelist validity
check <- vapply(scalelist, function(scale) {
all(inherits(scale, "Scale"),
inherits(scale, "ggproto"),
inherits(scale, "gg"))
}, logical(1))
if (!all(check)) {
cli::cli_abort(
"The {.arg scalelist} argument must have valid {.cls Scale} objects as \\
list-elements."
)
}
# Check scale aesthetics
aesthetics <- lapply(scalelist, `[[`, "aesthetics")
if (any(lengths(aesthetics) > 1)) {
cli::cli_abort(
"{.fn scale_listed} can only accept 1 aesthetic per scale."
)
}
aesthetics <- unlist(aesthetics)
if (length(aesthetics) != length(replaces)) {
cli::cli_abort(
"Every scale in the {.arg scalelist} argument must have set \\
valid aesthetics."
)
}
# Interpret guides
scalelist <- lapply(seq_along(scalelist), function(i){
scale <- scalelist[[i]]
guide <- scale$guide
if (identical(guide, "none") || identical(guide, FALSE)) {
return(scale)
}
if (!inherits(guide, c("guide", "Guide"))) {
guide <- match.fun(paste0("guide_", guide))()
}
if (inherits(guide, "Guide")) {
old <- guide
guide <- ggproto(NULL, old)
}
if (!("any" %in% guide$available_aes)) {
guide$available_aes <- scale$aesthetics
} else {
guide$available_aes <- c(guide$available_aes, scale$aesthetics)
}
scale$guide <- guide
return(scale)
})
splitlist <- split(scalelist, replaces)
splitaes <- split(aesthetics, replaces)
out <- lapply(names(splitlist), function(aes) {
structure(list(scales = splitlist[[aes]],
aes = splitaes[[aes]],
replaced_aes = aes),
class = "MultiScale")
})
return(out)
}
# S3 add method --------------------------------------------------------------
#' @usage NULL
#' @format NULL
#' @noRd
#' @export
#' @keywords internal
ggplot_add.MultiScale <- function(object, plot, object_name){
for (i in object$scales){
plot$scales$add(i)
}
replaced_aes <- object$replaced_aes
replaced_pattern <- paste0("^", replaced_aes, "$")
plot$layers <- lapply(plot$layers, function(lay){
if (!any(names(lay$mapping) %in% object$aes)) {
return(lay)
}
new_aes <- object$aes[object$aes %in% names(lay$mapping)]
new_aes_pattern <- paste0("^", new_aes, "$")
old_geom <- lay$geom
old_geom_nahandle <- old_geom$handle_na
new_geom_nahandle <- function(self, data, params){
colnames(data) <- eval(gsub(new_aes_pattern,
replaced_aes,
colnames(data)))
old_geom_nahandle(data, params)
}
draw_key_old <- old_geom$draw_key
draw_key_new <- function(data, params, size) {
colnames(data) <- eval(gsub(new_aes_pattern,
replaced_aes,
colnames(data)))
draw_key_old(data, params, size)
}
new_geom <-
ggproto(
paste0("New", new_aes, class(old_geom)[1]),
old_geom,
handle_na =
new_geom_nahandle,
default_aes =
setNames(old_geom$default_aes,
gsub(replaced_pattern,
new_aes,
names(old_geom$default_aes))),
non_missing_aes =
gsub(replaced_pattern,
new_aes,
old_geom$non_missing_aes),
optional_aes =
gsub(replaced_pattern,
new_aes,
old_geom$optional_aes),
required_aes =
gsub(replaced_pattern,
new_aes,
old_geom$required_aes),
draw_key = draw_key_new
)
lay$geom <- new_geom
return(lay)
})
return(plot)
}
.all_aesthetics <- c(
"adj", "alpha", "angle", "bg", "cex", "col", "color", "colour", "fg", "fill",
"group", "hjust", "label", "linetype", "lower", "lty", "lwd", "max", "middle",
"min", "pch", "radius", "sample", "shape", "size", "srt", "upper", "vjust",
"weight", "width", "x", "xend", "xmax", "xmin", "xintercept", "y", "yend",
"ymax", "ymin", "yintercept", "z"
)
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