calculate_pseudocount: Calculate data-driven pseudocount for log transformation
In ggpicrust2: Make 'PICRUSt2' Output Analysis and Visualization Easier
calculate_pseudocount R Documentation
Calculate data-driven pseudocount for log transformation
Description
Calculates a pseudocount based on the data to avoid log(0) issues.
Uses half of the minimum non-zero value to ensure the pseudocount
is smaller than any real value in the data.
Usage
calculate_pseudocount(values)
Arguments
values
Numeric vector of abundance values
Value
Pseudocount value (half of minimum non-zero value, or 1e-6 fallback)
ggpicrust2 documentation built on April 10, 2026, 5:06 p.m.
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| calculate_pseudocount | R Documentation |
Calculate data-driven pseudocount for log transformation
Description
Calculates a pseudocount based on the data to avoid log(0) issues. Uses half of the minimum non-zero value to ensure the pseudocount is smaller than any real value in the data.
Usage
calculate_pseudocount(values)
Arguments
values |
Numeric vector of abundance values |
Value
Pseudocount value (half of minimum non-zero value, or 1e-6 fallback)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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